CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Brh_R009309
(
Buceros rhinoceros
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Brh_R009309
T133615_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM15
M10222_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM15_04
0.817
0.967
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Brh_R009309
C2H2 ZF
357
379
YQCSICSKIFQNSSNLSRHIRSH
Brh_R009309
C2H2 ZF
384
407
FKCEECAKLFSRKESLKQHVSYKH
Brh_R009309
C2H2 ZF
418
438
YKCTTCEKAFRIESALEFHNC
Brh_R009309
C2H2 ZF
445
467
FQCEMCFRFFSTNSNLSKHKKKH
Brh_R009309
C2H2 ZF
472
494
FACEICNKMFYRKDVMLDHQRRH
Brh_R009309
C2H2 ZF
523
543
CPVCGKVFSCRSNMNKHLLTH
Brh_R009309
C2H2 ZF
548
570
YTCEICGRKFFRVDVLRDHIHVH
Brh_R009309
C2H2 ZF
611
634
YSCKRCQLTFGRGKEYLKHIMDVH
Brh_R009309
C2H2 ZF
639
661
YGCSICNRRFALKATYHAHMVIH
Brh_R009309
C2H2 ZF
675
697
HPCEICGRIFNSIGNLERHKLIH
Brh_R009309
C2H2 ZF
703
725
HACEQCGKSFARKDMLKEHMRVH
Brh_R009309
C2H2 ZF
731
753
YLCAECGKGMKTKHALRHHMKLH
Brh_R009309
C2H2 ZF
759
781
YECKECHRKFAQKVNMLKHYKRH
Brh_R009309
C2H2 ZF
787
809
FMCELCGKTFSERNTMETHKLIH
Brh_R009309
C2H2 ZF
815
838
WTCSVCDKKYVTDYMLQKHIQLTH
Brh_R009309
C2H2 ZF
844
867
QSCQLCGTKVSTRASMSRHMRRKH
Links
Other
C2H2 ZF
family TFs
Other
Buceros rhinoceros
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FIBRA_04347
Fibroporia radiculosa
FIBRA_04347
N
FOMPIDRAFT_1050634
Fomitopsis pinicola
FOMPIDRAFT_1050634
N
GALMADRAFT_218883
Galerina marginata
GALMADRAFT_218883
N
GLOTRDRAFT_134823
Gloeophyllum trabeum
GLOTRDRAFT_134823
N
M413DRAFT_199687
Hebeloma cylindrosporum
M413DRAFT_199687
N
HETIRDRAFT_413015
Heterobasidion irregulare
HETIRDRAFT_413015
N
JAAARDRAFT_358376
Jaapia argillacea
JAAARDRAFT_358376
N
K443DRAFT_131968
Laccaria amethystina
K443DRAFT_131968
N
LACBIDRAFT_301549
Laccaria bicolor
LACBIDRAFT_301549
N
Moror_1728
Moniliophthora roreri
Moror_1728
N
PHLGIDRAFT_130292
Phlebiopsis gigantea
PHLGIDRAFT_130292
N
PILCRDRAFT_820707
Piloderma croceum
PILCRDRAFT_820707
N
PISMIDRAFT_447413
Pisolithus microcarpus
PISMIDRAFT_447413
N
M404DRAFT_998487
Pisolithus tinctorius
M404DRAFT_998487
N
PLEOSDRAFT_1102393
Pleurotus ostreatus
PLEOSDRAFT_1102393
N
SCLCIDRAFT_494343
Scleroderma citrinum
SCLCIDRAFT_494343
N