Cmyd_10014556 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10014556 T134396_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp410
M00140_2.00 		Mus musculus
CYATCCCA
TGGGATRG		 PBM
Badis et al.(2009)
Zfp410_3034 		0.801 0.948
ZNF410
M02882_2.00 		Homo sapiens
KVNTATTATGGGATGKN
NMCATCCCATAATANBM		 SELEX
Jolma et al.(2013)
ZNF410_1 		0.801 0.948
ZNF410
M04435_2.00 		Homo sapiens
NTATTATGGGNTRB
VYANCCCATAATAN		 SELEX
Yin et al.(2017)
ZNF410_eDBD_HT-SELEX 		0.801 0.948
ZNF410
M04436_2.00 		Homo sapiens
NTATTATGGGHTRB
VYADCCCATAATAN		 SELEX
Yin et al.(2017)
ZNF410_eDBD_Methyl-HT-SELEX 		0.801 0.948
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10014556 C2H2 ZF 277 301
Cmyd_10014556 C2H2 ZF 307 331
Cmyd_10014556 C2H2 ZF 337 361
Cmyd_10014556 C2H2 ZF 367 391
Cmyd_10014556 C2H2 ZF 397 420

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018233 Ailuropoda melanoleuca ENSAMEG00000018233 I 0.799
Alligator_sinensis_CCG009677.1 Alligator sinensis Alligator_sinensis_CCG009677.1 I 0.825
ZNF410 Anolis carolinensis ENSACAG00000016111 I 0.794
Afo_R004479 Aptenodytes forsteri Afo_R004479 I 0.825
ENSAMXG00000020476 Astyanax mexicanus ENSAMXG00000020476 I 0.767
ENSP00000407130-D1 Bos grunniens ENSP00000407130-D1 I 0.773
ZNF410 Bos taurus ENSBTAG00000020327 I 0.809
Brh_R010947 Buceros rhinoceros Brh_R010947 I 0.814
ZNF410 Callithrix jacchus ENSCJAG00000020308 I 0.801
Aan_R005705 Calypte anna Aan_R005705 I 0.825
ZNF410 Canis familiaris ENSCAFG00000016876 I 0.799
ZNF410 Cavia porcellus ENSCPOG00000009601 I 0.795
ENSCSAG00000012661 Chlorocebus sabaeus ENSCSAG00000012661 I 0.801
ZNF410 Equus caballus ENSECAG00000014531 I 0.799
ZNF410 Felis catus ENSFCAG00000030643 I 0.799
ENSFALG00000006227 Ficedula albicollis ENSFALG00000006227 I 0.823
ZNF410 Gallus gallus ENSGALG00000010193 I 0.825
Gfo_R012933 Geospiza fortis Gfo_R012933 I 0.823
ZNF410 Gorilla gorilla ENSGGOG00000000715 I 0.801
ZNF410 Homo sapiens ENSG00000119725 D 0.801
ENSLOCG00000011015 Lepisosteus oculatus ENSLOCG00000011015 I 0.793
ZNF410 Loxodonta africana ENSLAFG00000018117 I 0.795
ENSMMUP00000014588 Macaca fascicularis ENSMMUP00000014588 I 0.801
ZNF410 Macaca mulatta ENSMMUG00000011144 I 0.801
ZNF410 Meleagris gallopavo ENSMGAG00000012603 I 0.825
ZNF410 Microcebus murinus ENSMICG00000002992 I 0.799
ZNF410 Monodelphis domestica ENSMODG00000006622 I 0.798
ENSMPUG00000009582 Mustela putorius furo ENSMPUG00000009582 I 0.809
Zfp410 Mus musculus ENSMUSG00000042472 D 0.801
Myotis_brandtii_ZNF410_10012915 Myotis brandtii Myotis_brandtii_ZNF410_10012915 I 0.799
ZNF410 Myotis lucifugus ENSMLUG00000008658 I 0.799
ENSNLEG00000016090 Nomascus leucogenys ENSNLEG00000016090 I 0.801
ZNF410 Oryctolagus cuniculus ENSOCUG00000006787 I 0.795
ENSOARG00000000761 Ovis aries ENSOARG00000000761 I 0.809
ZNF410 Pan troglodytes ENSPTRG00000006525 I 0.801
ENSPANG00000013439 Papio anubis ENSPANG00000013439 I 0.801
ENSPSIG00000014551 Pelodiscus sinensis ENSPSIG00000014551 I 0.827
Pvit_15628 Pogona vitticeps Pvit_15628 I 0.800
ZNF410 Procavia capensis ENSPCAG00000010015 I 0.799
ZNF410 Pteropus vampyrus ENSPVAG00000000640 I 0.799
Zfp410 Rattus norvegicus ENSRNOG00000010985 I 0.801
ENSSHAG00000004595 Sarcophilus harrisii ENSSHAG00000004595 I 0.798
ZNF410 Sus scrofa ENSSSCG00000002352 I 0.799
ZNF410 Taeniopygia guttata ENSTGUG00000012076 I 0.823
ENSTSYG00000005601 Tarsius syrichta ENSTSYG00000005601 I 0.799
Tal_R011336 Tyto alba Tal_R011336 I 0.825
ZNF410 Vicugna pacos ENSVPAG00000000794 I 0.799
ENSXMAG00000008410 Xiphophorus maculatus ENSXMAG00000008410 I 0.766