Cmyd_10020515 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10020515 T134471_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10020515 C2H2 ZF 2 21
Cmyd_10020515 C2H2 ZF 27 51
Cmyd_10020515 C2H2 ZF 57 81

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK23829.1 Cannabis sativa PK23829.1 D
PK17526.1 Cannabis sativa PK17526.1 D
evm.TU.supercontig_5.314 Carica papaya evm.TU.supercontig_5.314 I
evm.TU.supercontig_35.12 Carica papaya evm.TU.supercontig_35.12 I
evm.TU.supercontig_13.248 Carica papaya evm.TU.supercontig_13.248 I
evm.TU.supercontig_13.246 Carica papaya evm.TU.supercontig_13.246 I
Ca_17598 Cicer arietinum Ca_17598 I
Ca_17597 Cicer arietinum Ca_17597 I
Ciclev10021454m.g Citrus clementina Ciclev10021454m.g I
orange1.1g022562m.g Citrus sinensis orange1.1g022562m.g I
Cucsa.098110 Cucumis sativus Cucsa.098110 I
Eucgr.B00377 Eucalyptus grandis Eucgr.B00377 I
gene09510-v1.0-hybrid Fragaria vesca gene09510-v1.0-hybrid I
GLYMA05G01640 Glycine max GLYMA05G01640 I
GLYMA04G34720 Glycine max GLYMA04G34720 I
GLYMA06G19960 Glycine max GLYMA06G19960 I
GLYMA17G10250 Glycine max GLYMA17G10250 I
Gorai.007G034000 Gossypium raimondii Gorai.007G034000 I
MLOC_20277 Hordeum vulgare MLOC_20277 I
Lus10004248.g Linum usitatissimum Lus10004248.g I
Lus10036652.g Linum usitatissimum Lus10036652.g I
LjSGA_014616.1 Lotus japonicus LjSGA_014616.1 I
chr2.CM0028.230.nd Lotus japonicus chr2.CM0028.230.nd I
chr6.CM0114.280.nc Lotus japonicus chr6.CM0114.280.nc I
MDP0000230601 Malus domestica MDP0000230601 I
MDP0000758053 Malus domestica MDP0000758053 I
cassava17572.valid.m1 Manihot esculenta cassava17572.valid.m1 I
cassava23010.valid.m1 Manihot esculenta cassava23010.valid.m1 I
cassava23011.valid.m1 Manihot esculenta cassava23011.valid.m1 I
MTR_4g107230 Medicago truncatula MTR_4g107230 I
MTR_5g027550 Medicago truncatula MTR_5g027550 N
MTR_5g027570 Medicago truncatula MTR_5g027570 N
MTR_5g088010 Medicago truncatula MTR_5g088010 N
MTR_5g088060 Medicago truncatula MTR_5g088060 I
mgf003276m Mimulus guttatus mgf003276m I
gw1.89.65.1 Physcomitrella patens gw1.89.65.1 I
POPTR_0010s04860 Populus trichocarpa POPTR_0010s04860 I
POPTR_0008s19610 Populus trichocarpa POPTR_0008s19610 I
Pm024648 Prunus mume Pm024648 I
PRUPE_ppa009283mg Prunus persica PRUPE_ppa009283mg I
30147.m014028 Ricinus communis 30147.m014028 I
SapurV1A.0113s0280 Salix purpurea SapurV1A.0113s0280 I
SapurV1A.0007s0060 Salix purpurea SapurV1A.0007s0060 I
SELMODRAFT_439294 Selaginella moellendorffii SELMODRAFT_439294 I
SELMODRAFT_445372 Selaginella moellendorffii SELMODRAFT_445372 I
SELMODRAFT_84280 Selaginella moellendorffii SELMODRAFT_84280 I
Solyc06g071230.2 Solanum lycopersicum Solyc06g071230.2 I
Solyc04g005100.2 Solanum lycopersicum Solyc04g005100.2 I
Solyc03g113620.2 Solanum lycopersicum Solyc03g113620.2 I
PGSC0003DMG400001913 Solanum tuberosum PGSC0003DMG400001913 I
PGSC0003DMG400033030 Solanum tuberosum PGSC0003DMG400033030 I
PGSC0003DMG400024572 Solanum tuberosum PGSC0003DMG400024572 I
Sb03g006450 Sorghum bicolor Sb03g006450 I
TCM_013524 Theobroma cacao TCM_013524 I
Traes_3AS_6626D4A69 Triticum aestivum Traes_3AS_6626D4A69 I
Traes_3DS_8AF1A10AB Triticum aestivum Traes_3DS_8AF1A10AB I
VIT_17s0000g07510 Vitis vinifera VIT_17s0000g07510 I