ENSP00000228437-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSP00000228437-D1 T134901_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM4
M02881_2.00 		Homo sapiens
TTTCAAGGCCCCC
GGGGGCCTTGAAA		 SELEX
Jolma et al.(2013)
PRDM4_1 		0.827 1.000
PRDM4
M04421_2.00 		Homo sapiens
YRRCNGTTTCAAGKCYMCCC
GGGKRGMCTTGAAACNGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX 		0.827 1.000
PRDM4
M04422_2.00 		Homo sapiens
YRGCRGTTTCRAGGSTTVCC
GGBAASCCTYGAAACYGCYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1 		0.827 1.000
PRDM4
M04423_2.00 		Homo sapiens
YRRCRGTTTCRAGKSYNCCC
GGGNRSMCTYGAAACYGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000228437-D1 C2H2 ZF 587 609
ENSP00000228437-D1 C2H2 ZF 615 637
ENSP00000228437-D1 C2H2 ZF 643 665
ENSP00000228437-D1 C2H2 ZF 671 693
ENSP00000228437-D1 C2H2 ZF 699 721
ENSP00000228437-D1 C2H2 ZF 727 748

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_079170 Acremonium chrysogenum ACRE_079170 N 0.000
BBA_04448 Beauveria bassiana BBA_04448 N 0.000
FFUJ_01364 Fusarium fujikuroi FFUJ_01364 N 0.000
FGRRES_01172 Fusarium graminearum FGRRES_01172 N 0.000
FOXG_00219 Fusarium oxysporum FOXG_00219 N 0.000
FPSE_02603 Fusarium pseudograminearum FPSE_02603 N 0.000
NechaG89979 Fusarium solani NechaG89979 N 0.000
FVEG_01299 Fusarium verticillioides FVEG_01299 N 0.000
MAC_04201 Metarhizium acridum MAC_04201 N 0.000
MANI_024672 Metarhizium anisopliae MANI_024672 N 0.000
MBR_03632 Metarhizium brunneum MBR_03632 N 0.000
MGU_04822 Metarhizium guizhouense MGU_04822 N 0.000
MAJ_02155 Metarhizium majus MAJ_02155 N 0.000
X797_003689 Metarhizium robertsii X797_003689 N 0.000
fgenesh1_pm.sca_1_chr1_3_0000112 Nectria haematococca fgenesh1_pm.sca_1_chr1_3_0000112 N 0.000
OCS_04252 Ophiocordyceps sinensis OCS_04252 N 0.000
S40288_08147 Stachybotrys chartarum S40288_08147 N 0.000
S40285_00886 Stachybotrys chlorohalonata S40285_00886 N 0.000
VHEMI06418 Torrubiella hemipterigena VHEMI06418 N 0.000
TRIATDRAFT_221642 Trichoderma atroviride TRIATDRAFT_221642 N 0.000
TRIREDRAFT_78895 Trichoderma reesei TRIREDRAFT_78895 N 0.000
TRIVIDRAFT_35417 Trichoderma virens TRIVIDRAFT_35417 N 0.000