CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gfo_R005435
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R005435
T135722_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R005435
C2H2 ZF
168
189
KKLCSKTFSTMHELVTHVTVEH
Gfo_R005435
C2H2 ZF
198
225
HICFWEECPREGKPFKAKYKLVNHIRVH
Gfo_R005435
C2H2 ZF
231
255
FPCPFPGCGKVFARSENLKIHKRTH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Aa01633
Panicum virgatum
Pavir.Aa01633
N
Pavir.J27495
Panicum virgatum
Pavir.J27495
N
Si024429m.g
Setaria italica
Si024429m.g
N