CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R009586
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R009586
T135800_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R009586
C2H2 ZF
202
226
FRCRQCSAAYDTLVELTVHMNETGH
Gfo_R009586
C2H2 ZF
262
286
LKCMFCGDSFDSLQDLSVHMIKTKH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
189 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.095530
Cucumis sativus
Cucsa.095530
N
OBART05G10920
Oryza barthii
OBART05G10920
N
ORGLA05G0094200
Oryza glaberrima
ORGLA05G0094200
N
OGLUM05G11530
Oryza glumaepatula
OGLUM05G11530
N
BGIOSGA018332
Oryza indica
BGIOSGA018332
N
OMERI05G09610
Oryza meridionalis
OMERI05G09610
N
ONIVA05G11290
Oryza nivara
ONIVA05G11290
N
ORUFI05G11790
Oryza rufipogon
ORUFI05G11790
N
OS05G0305700
Oryza sativa
OS05G0305700
N
Si023090m.g
Setaria italica
Si023090m.g
N