Ogr12877 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr12877 T136683_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr12877 C2H2 ZF 193 215
Ogr12877 C2H2 ZF 221 243
Ogr12877 C2H2 ZF 249 271
Ogr12877 C2H2 ZF 277 300

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00045p00124580 Amborella trichopoda AMTR_s00045p00124580 I
Aquca_003_00290 Aquilegia coerulea Aquca_003_00290 I
Aquca_026_00251 Aquilegia coerulea Aquca_026_00251 I
fgenesh2_kg.6__2771__AT5G28040.1 Arabidopsis lyrata fgenesh2_kg.6__2771__AT5G28040.1 I
fgenesh2_kg.3__469__AT3G04930.1 Arabidopsis lyrata fgenesh2_kg.3__469__AT3G04930.1 I
AT5G28040 Arabidopsis thaliana AT5G28040 I
AT3G04930 Arabidopsis thaliana AT3G04930 D
Bostr.29827s0034 Boechera stricta Bostr.29827s0034 I
Bostr.2570s0201 Boechera stricta Bostr.2570s0201 I
Bo7g093330 Brassica oleracea Bo7g093330 I
Bo5g146880 Brassica oleracea Bo5g146880 I
Bo1g151840 Brassica oleracea Bo1g151840 I
Bra009986 Brassica rapa Bra009986 I
Bra040416 Brassica rapa Bra040416 I
PK20442.1 Cannabis sativa PK20442.1 D
Cagra.2179s0002 Capsella grandiflora Cagra.2179s0002 I
Cagra.1554s0002 Capsella grandiflora Cagra.1554s0002 I
Carubv10013683m.g Capsella rubella Carubv10013683m.g I
Carubv10001022m.g Capsella rubella Carubv10001022m.g I
evm.TU.supercontig_264.16 Carica papaya evm.TU.supercontig_264.16 I
Ca_03737 Cicer arietinum Ca_03737 I
Ca_01216 Cicer arietinum Ca_01216 I
Cla011457 Citrullus lanatus Cla011457 I
Ciclev10001378m.g Citrus clementina Ciclev10001378m.g I
orange1.1g014693m.g Citrus sinensis orange1.1g014693m.g I
Cucsa.288940 Cucumis sativus Cucsa.288940 I
Eucgr.H04388 Eucalyptus grandis Eucgr.H04388 I
Thhalv10005455m.g Eutrema salsugineum Thhalv10005455m.g I
Thhalv10020724m.g Eutrema salsugineum Thhalv10020724m.g I
gene16487-v1.0-hybrid Fragaria vesca gene16487-v1.0-hybrid I
GLYMA03G40520 Glycine max GLYMA03G40520 I
GLYMA20G37240 Glycine max GLYMA20G37240 I
GLYMA19G43180 Glycine max GLYMA19G43180 I
GLYMA10G30160 Glycine max GLYMA10G30160 I
GLYMA05G14455 Glycine max GLYMA05G14455 I
Gorai.007G285700 Gossypium raimondii Gorai.007G285700 I
Gorai.013G121800 Gossypium raimondii Gorai.013G121800 I
Lus10019007.g Linum usitatissimum Lus10019007.g I
Lus10015944.g Linum usitatissimum Lus10015944.g I
LjB12P21.40.nc Lotus japonicus LjB12P21.40.nc I
MDP0000931426 Malus domestica MDP0000931426 I
MDP0000290147 Malus domestica MDP0000290147 I
MDP0000274864 Malus domestica MDP0000274864 I
cassava22731.valid.m1 Manihot esculenta cassava22731.valid.m1 I
MTR_7g114600 Medicago truncatula MTR_7g114600 I
mgf017918m Mimulus guttatus mgf017918m I
POPTR_1258s00200 Populus trichocarpa POPTR_1258s00200 I
POPTR_0009s06130 Populus trichocarpa POPTR_0009s06130 I
POPTR_0001s26910 Populus trichocarpa POPTR_0001s26910 I
PRUPE_ppa006905mg Prunus persica PRUPE_ppa006905mg I
30128.m008635 Ricinus communis 30128.m008635 I
SapurV1A.0027s0820 Salix purpurea SapurV1A.0027s0820 I
SapurV1A.0276s0160 Salix purpurea SapurV1A.0276s0160 I
Solyc02g083750.1 Solanum lycopersicum Solyc02g083750.1 I
Solyc01g097890.2 Solanum lycopersicum Solyc01g097890.2 I
PGSC0003DMG400022471 Solanum tuberosum PGSC0003DMG400022471 I
PGSC0003DMG400003572 Solanum tuberosum PGSC0003DMG400003572 I
TCM_026408 Theobroma cacao TCM_026408 I