Pvit_01078 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_01078 T136863_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.827 1.000
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.827 1.000
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.827 1.000
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.827 1.000
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.827 1.000
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.827 1.000
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.827 1.000
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.827 1.000
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_01078 C2H2 ZF 433 455
Pvit_01078 C2H2 ZF 474 495
Pvit_01078 C2H2 ZF 501 523
Pvit_01078 C2H2 ZF 529 552

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CADANGAG00008701 Aspergillus niger CADANGAG00008701 N 0.000
BGHDH14_bgh03978 Blumeria graminis BGHDH14_bgh03978 N 0.000
CaO19.10530 Candida albicans CaO19.10530 N 0.000
CaO19.3012 Candida albicans CaO19.3012 N 0.000
PGUG_04328 Candida guilliermondii PGUG_04328 N 0.000
G210_2857 Candida maltosa G210_2857 N 0.000
CORT_0B09660 Candida orthopsilosis CORT_0B09660 N 0.000
CPAG_00950 Candida parapsilosis CPAG_00950 N 0.000
CANTEDRAFT_111614 Candida tenuis CANTEDRAFT_111614 N 0.000
CTRG_04783 Candida tropicalis CTRG_04783 N 0.000
CNI01500 Cryptococcus neoformans CNI01500 N 0.000
DEHA2G12628g Debaryomyces hansenii DEHA2G12628g N 0.000
EV44_g5837 Erysiphe necator EV44_g5837 N 0.000
KLLA0_A01804g Kluyveromyces lactis KLLA0_A01804g N 0.000
LELG_01533 Lodderomyces elongisporus LELG_01533 N 0.000
PGUG_04328 Meyerozyma guilliermondii PGUG_04328 N 0.000
GNLVRS01_PISO0E09332g Millerozyma farinosa GNLVRS01_PISO0E09332g N 0.000
GNLVRS01_PISO0F10697g Millerozyma farinosa GNLVRS01_PISO0F10697g N 0.000
OIDMADRAFT_134351 Oidiodendron maius OIDMADRAFT_134351 N 0.000
e_gww1.6.1.89.1 Pichia stipitis e_gww1.6.1.89.1 N 0.000
PICST_61599 Scheffersomyces stipitis PICST_61599 N 0.000
SPAPADRAFT_145658 Spathaspora passalidarum SPAPADRAFT_145658 N 0.000
BN7_5384 Wickerhamomyces ciferrii BN7_5384 N 0.000
YALI0_C18645g Yarrowia lipolytica YALI0_C18645g N 0.000