Pvit_14266 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_14266 T137392_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YY1
M08237_2.00 		Homo sapiens
VNVGCVGCCATBTTD
HAAVATGGCBGCBNB		 ChIP-seq
Najafabadi et al.(2015b)
YY1 		0.827 1.000
YY1
M02877_2.00 		Homo sapiens
NVSRCCATNDH
DHNATGGYSBN		 SELEX
Jolma et al.(2013)
YY1_1 		0.827 0.989
YY1
M04406_2.00 		Homo sapiens
NDCCATYTTKRRBNDWNHGTGCK
MGCACDNWHNVYYMAARATGGHN		 SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_1 		0.827 0.989
YY1
M04407_2.00 		Homo sapiens
NKMCGCCATYTTGN
NCAARATGGCGKMN		 SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_2 		0.827 0.989
YY1
M05845_2.00 		Homo sapiens
NNNVGCCATNWYD
HRWNATGGCBNNN		 SMiLE-seq
Isakova et al.(2017)
YY1 		0.827 0.989
YY1
M08288_2.00 		Homo sapiens
GCCGCCATBKYB
VRMVATGGCGGC		 ChIP-seq
Schmitges et al.(2016)
P25490_1-4.RCADE 		0.827 0.989
YY1
M08085_2.00 		Homo sapiens
KCVGCCATBTTK
MAAVATGGCBGM		 ChIP-seq
Mathelier et al.(2014)
MA0095.2 		0.827 0.989
YY1
M07855_2.00 		Homo sapiens
VNVGCCGCCATBTTK
MAAVATGGCGGCBNB		 ChIP-seq
Gerstein et al.(2012)
GM12878_YY1_HudsonAlpha 		0.827 0.989
YY1
M07856_2.00 		Homo sapiens
GCSGCCATBTT
AAVATGGCSGC		 ChIP-seq
Gerstein et al.(2012)
GM12891_YY1_HudsonAlpha 		0.827 0.989
YY1
M07857_2.00 		Homo sapiens
BSNVGCSGCCATBTT
AAVATGGCSGCBNSV		 ChIP-seq
Gerstein et al.(2012)
GM12892_YY1_HudsonAlpha 		0.827 0.989
YY1
M07858_2.00 		Homo sapiens
NNVGCSGCCATBTTK
MAAVATGGCSGCBNN		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_YY1_HudsonAlpha 		0.827 0.989
YY1
M07859_2.00 		Homo sapiens
SBSGCSGCCATBTTK
MAAVATGGCSGCSVS		 ChIP-seq
Gerstein et al.(2012)
K562b_YY1_UCD 		0.827 0.989
YY1
M07860_2.00 		Homo sapiens
GCCGCCATBTTKNNN
NNNMAAVATGGCGGC		 ChIP-seq
Gerstein et al.(2012)
K562_YY1_HudsonAlpha 		0.827 0.989
YY1
M07861_2.00 		Homo sapiens
VGCSGCCATBTTK
MAAVATGGCSGCB		 ChIP-seq
Gerstein et al.(2012)
NT2-D1_YY1_UCD 		0.827 0.989
YY1
M08865_2.00 		Homo sapiens
GCCGCCATYTTK
MAARATGGCGGC		 Misc
Kulakovskiy et al.(2013)
TYY1_HUMAN.H11MO.0.A 		0.827 0.989
Yy1
M08971_2.00 		Mus musculus
GCCGCCATBTTB
VAAVATGGCGGC		 Misc
Kulakovskiy et al.(2013)
TYY1_MOUSE.H11MO.0.A 		0.827 0.989
YY1
M10138_2.00 		Homo sapiens
NVNNDCCATNTWNNVWN
NWBNNWANATGGHNNBN		 Transfac
Matys et al.(2006)
V$YY1_01 		0.827 0.989
YY1
M10139_2.00 		Homo sapiens
NNNSBGCCATCTDSNHTSND
HNSADNSHAGATGGCVSNNN		 Transfac
Matys et al.(2006)
V$YY1_02 		0.827 0.989
YY1
M10140_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_03 		0.827 0.989
YY1
M10141_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_07 		0.827 0.989
YY1
M10142_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_08 		0.827 0.989
YY1
M10143_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_Q4_01 		0.827 0.989
YY1
M10144_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_Q6_02 		0.827 0.989
YY1
M10145_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_Q6_03 		0.827 0.989
YY1
M10146_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY1_Q6 		0.827 0.989
YY1
M04408_2.00 		Homo sapiens
NDCCATYTTKRRCDDWWHGTGCY
RGCACDWWHHGYYMAARATGGHN		 SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_1 		0.827 0.989
YY1
M04409_2.00 		Homo sapiens
RKCSGCCATYTTGD
HCAARATGGCSGMY		 SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_2 		0.827 0.989
TYY2_RAT
M10385_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YY2 		0.816 0.902
pho
M06053_2.00 		Drosophila melanogaster
KNVGCCATDAHNSY
RSNDTHATGGCBNM		 B1H
Zhu et al.(2011)
pho_FlyReg_FBgn0002521 		0.809 0.935
pho
M06054_2.00 		Drosophila melanogaster
KCCGCCATHWTK
MAWDATGGCGGM		 B1H
Zhu et al.(2011)
pho_SANGER_10_FBgn0002521 		0.809 0.935
pho
M06055_2.00 		Drosophila melanogaster
NKBCGCCATHWTKNN
NNMAWDATGGCGVMN		 B1H
Zhu et al.(2011)
pho_SOLEXA_5_FBgn0002521 		0.809 0.935
phol
M06144_2.00 		Drosophila melanogaster
CGCCATHTTK
MAADATGGCG		 B1H
Zhu et al.(2011)
phol_SANGER_5_FBgn0035997 		0.767 0.826
phol
M06145_2.00 		Drosophila melanogaster
NKNCGCCATNTTKNN
NNMAANATGGCGNMN		 B1H
Zhu et al.(2011)
phol_SOLEXA_5_FBgn0035997 		0.767 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_14266 C2H2 ZF 42 66
Pvit_14266 C2H2 ZF 71 93
Pvit_14266 C2H2 ZF 99 123
Pvit_14266 C2H2 ZF 129 153

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000000319 Ailuropoda melanoleuca ENSAMEG00000000319 N
Alligator_sinensis_CCG001547.1 Alligator sinensis Alligator_sinensis_CCG001547.1 N
ENSP00000398837-D1 Bos grunniens ENSP00000398837-D1 N
KMT2B Bos taurus ENSBTAG00000002763 N
KMT2B Callithrix jacchus ENSCJAG00000010126 I
KMT2B Canis familiaris ENSCAFG00000006878 N
KMT2B Cavia porcellus ENSCPOG00000003718 N
ENSCSAG00000004387 Chlorocebus sabaeus ENSCSAG00000004387 N
KMT2B Dasypus novemcinctus ENSDNOG00000005517 N
Kmt2b Dipodomys ordii ENSDORG00000009061 N
ENSECAG00000007605 Equus caballus ENSECAG00000007605 N
KMT2B Erinaceus europaeus ENSEEUG00000013250 N
KMT2B Felis catus ENSFCAG00000006381 N
ENSGACG00000004248 Gasterosteus aculeatus ENSGACG00000004248 N
KMT2B Gorilla gorilla ENSGGOG00000016796 N
KMT2B Homo sapiens ENSG00000272333 N
ENSSTOG00000027453 Ictidomys tridecemlineatus ENSSTOG00000027453 N
KMT2B Loxodonta africana ENSLAFG00000018741 N
ENSP00000398837 Macaca fascicularis ENSP00000398837 N
KMT2B Macaca mulatta ENSMMUG00000002381 N
ENSMEUG00000014580 Macropus eugenii ENSMEUG00000014580 N
KMT2B Microcebus murinus ENSMICG00000009928 N
KMT2B Monodelphis domestica ENSMODG00000013994 N
ENSMPUG00000006206 Mustela putorius furo ENSMPUG00000006206 N
Kmt2b Mus musculus ENSMUSG00000006307 N
Myotis_brandtii_WBP7_10035154 Myotis brandtii Myotis_brandtii_WBP7_10035154 N
KMT2B Myotis lucifugus ENSMLUG00000011406 N
ENSNLEG00000011306 Nomascus leucogenys ENSNLEG00000011306 N
KMT2B Ochotona princeps ENSOPRG00000001336 N
Ogr13647 Ophisaurus gracilis Ogr13647 N
KMT2B Oryctolagus cuniculus ENSOCUG00000012768 N
KMT2B Otolemur garnettii ENSOGAG00000004157 N
ENSOARG00000004987 Ovis aries ENSOARG00000004987 N
KMT2B Pan troglodytes ENSPTRG00000010858 N
ENSPANG00000007179 Papio anubis ENSPANG00000007179 N
ENSPFOG00000008123 Poecilia formosa ENSPFOG00000008123 I
Pvit_00563 Pogona vitticeps Pvit_00563 N
ENSPPYG00000009877 Pongo abelii ENSPPYG00000009877 N
KMT2B Procavia capensis ENSPCAG00000004566 N
KMT2B Pteropus vampyrus ENSPVAG00000012828 N
Kmt2b Rattus norvegicus ENSRNOG00000055525 N
ENSSSCG00000002895 Sus scrofa ENSSSCG00000002895 N
ENSTRUG00000015234 Takifugu rubripes ENSTRUG00000015234 N
KMT2B Tupaia belangeri ENSTBEG00000007263 N
KMT2B Tursiops truncatus ENSTTRG00000002243 N
ENSXMAG00000015008 Xiphophorus maculatus ENSXMAG00000015008 I