Pvit_18806 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_18806 T137522_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIC2
M02902_2.00 		Homo sapiens
RTGCCMVNN
NNBKGGCAY		 SELEX
Jolma et al.(2013)
HIC2_1 		0.821 0.965
Hic1
M00141_2.00 		Mus musculus
RTGCCMNBN
NVNKGGCAY		 PBM
Badis et al.(2009)
Hic1_2816 		0.793 0.861
Hic1
M02933_2.00 		Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY		 SELEX
Jolma et al.(2013)
Hic1_1 		0.793 0.861
Hic1
M02934_2.00 		Mus musculus
RTGCCAVCN
NGBTGGCAY		 SELEX
Jolma et al.(2013)
Hic1_2 		0.793 0.861
Hic1
M09003_2.00 		Mus musculus
KGGCAMCCH
DGGKTGCCM		 Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C 		0.793 0.861
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_18806 C2H2 ZF 405 427
Pvit_18806 C2H2 ZF 464 486
Pvit_18806 C2H2 ZF 492 514
Pvit_18806 C2H2 ZF 520 542
Pvit_18806 C2H2 ZF 548 570

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG003245.1 Alligator sinensis Alligator_sinensis_CCG003245.1 I
ENSAPLG00000011008 Anas platyrhynchos ENSAPLG00000011008 I
ENSAMXG00000017946 Astyanax mexicanus ENSAMXG00000017946 I
ZBTB7A Bos taurus ENSBTAG00000020117 I
ZBTB7A Callithrix jacchus ENSCJAG00000036210 I
ZBTB7A Canis familiaris ENSCAFG00000024335 I
ENSCPOG00000024829 Cavia porcellus ENSCPOG00000024829 I
Cmyd_10015601 Chelonia mydas Cmyd_10015601 I
ENSCSAG00000010775 Chlorocebus sabaeus ENSCSAG00000010775 I
zbtb7a Danio rerio ENSDARG00000039899 I
ENSFALG00000000874 Ficedula albicollis ENSFALG00000000874 I
ENSGMOG00000008925 Gadus morhua ENSGMOG00000008925 I
zbtb7a Gasterosteus aculeatus ENSGACG00000012730 I
ZBTB7A Homo sapiens ENSG00000178951 D
ENSLOCG00000005993 Lepisosteus oculatus ENSLOCG00000005993 I
ENSMMUG00000019103 Macaca mulatta ENSMMUG00000019103 I
ENSMEUG00000005804 Macropus eugenii ENSMEUG00000005804 I
ZBTB7A Monodelphis domestica ENSMODG00000000778 I
ENSMPUG00000004703 Mustela putorius furo ENSMPUG00000004703 I
Zbtb7a Mus musculus ENSMUSG00000035011 D
Myotis_brandtii_ZBTB7A_10016304 Myotis brandtii Myotis_brandtii_ZBTB7A_10016304 I
ZBTB7A Myotis lucifugus ENSMLUG00000008667 I
ENSNLEG00000003007 Nomascus leucogenys ENSNLEG00000003007 I
Ogr12162 Ophisaurus gracilis Ogr12162 I
ENSONIG00000004814 Oreochromis niloticus ENSONIG00000004814 I
ZBTB7A Ornithorhynchus anatinus ENSOANG00000006290 I
ZBTB7A Otolemur garnettii ENSOGAG00000033963 I
ENSOARG00000010857 Ovis aries ENSOARG00000010857 I
ZBTB7A Pan troglodytes ENSPTRG00000010292 I
ENSPANG00000010574 Papio anubis ENSPANG00000010574 I
ENSPSIG00000017106 Pelodiscus sinensis ENSPSIG00000017106 I
ENSPFOG00000001889 Poecilia formosa ENSPFOG00000001889 I
Pvit_09830 Pogona vitticeps Pvit_09830 I
ZBTB7A Pteropus vampyrus ENSPVAG00000017500 I
Zbtb7a Rattus norvegicus ENSRNOG00000020161 I
ENSSHAG00000008804 Sarcophilus harrisii ENSSHAG00000008804 I
ZBTB7A Sus scrofa ENSSSCG00000029236 I
zbtb7a Takifugu rubripes ENSTRUG00000017896 I
zbtb7a Tetraodon nigroviridis ENSTNIG00000004415 I
ZBTB7A Tursiops truncatus ENSTTRG00000006780 I
ENSXMAG00000012740 Xiphophorus maculatus ENSXMAG00000012740 I