Tal_R002540 (Tyto alba)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Tal_R002540 T137599_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF76
M04398_2.00 		Homo sapiens
NNHWCCCABAATGCAHYRCRN
NYGYRDTGCATTVTGGGWDNN		 SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX 		0.795 0.938
ZNF76
M08278_2.00 		Homo sapiens
BCSCRNDGSMTBCTGGGARNT
ANYTCCCAGVAKSCHNYGSGV		 ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE 		0.795 0.938
ZNF76
M08856_2.00 		Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY
RDDGSMYBCTGGGARDKGKAGT		 Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C 		0.795 0.938
ZNF76
M04399_2.00 		Homo sapiens
NYTWCCCAYAATGCAHYRCDN
NHGYRDTGCATTRTGGGWARN		 SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX 		0.795 0.938
ZNF143
M02899_2.00 		Homo sapiens
YWCCCAYAATGCAYYG
CRRTGCATTRTGGGWR		 SELEX
Jolma et al.(2013)
ZNF143_1 		0.765 0.839
ZNF143
M07931_2.00 		Homo sapiens
RACTACAWYTCCCAG
CTGGGARWTGTAGTY		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford 		0.765 0.839
ZNF143
M08910_2.00 		Homo sapiens
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY		 Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A 		0.765 0.839
Zfp143
M09010_2.00 		Mus musculus
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY		 Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A 		0.765 0.839
ZNF143
M09510_2.00 		Homo sapiens
NNYTCCCAKVAKSCH
DGSMTBMTGGGARNN		 Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600 		0.765 0.839
ZNF143
M10247_2.00 		Homo sapiens
NYYWCCCABMATGCAHYRCRNB
VNYGYRDTGCATKVTGGGWRRN		 Transfac
Matys et al.(2006)
V$STAF_01 		0.765 0.839
ZNF143
M10248_2.00 		Homo sapiens
MHBWCCCAKVRTBCMWHGMRV
BYKCDWKGVAYBMTGGGWVDK		 Transfac
Matys et al.(2006)
V$STAF_02 		0.765 0.839
ZNF143
M10249_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STAF_Q4_01 		0.765 0.839
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R002540 C2H2 ZF 117 141
Tal_R002540 C2H2 ZF 147 171
Tal_R002540 C2H2 ZF 177 201
Tal_R002540 C2H2 ZF 207 231
Tal_R002540 C2H2 ZF 237 261
Tal_R002540 C2H2 ZF 267 291
Tal_R002540 C2H2 ZF 297 320

Links

Other C2H2 ZF family TFs
Other Tyto alba TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HES3 Callithrix jacchus ENSCJAG00000000154 N
HES3 Canis familiaris ENSCAFG00000019571 N
HES3 Cavia porcellus ENSCPOG00000026623 N
ENSDORG00000005188 Dipodomys ordii ENSDORG00000005188 N
HES3 Erinaceus europaeus ENSEEUG00000005956 N
HES3 Felis catus ENSFCAG00000028408 N
HES3 Homo sapiens ENSG00000173673 N
ENSSTOG00000010776 Ictidomys tridecemlineatus ENSSTOG00000010776 N
Hes3 Mus musculus ENSMUSG00000028946 N
HES3 Ochotona princeps ENSOPRG00000011063 N
ENSPANG00000020174 Papio anubis ENSPANG00000020174 N
HES3 Pteropus vampyrus ENSPVAG00000009777 N
Hes3 Rattus norvegicus ENSRNOG00000010893 N
HES3 Tupaia belangeri ENSTBEG00000002798 N