Tal_R013354 (Tyto alba)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Tal_R013354 T137729_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CTCF
M02878_2.00
Homo sapiens
WGCGCCMYCTAGYGGYV

BRCCRCTAGRKGGCGCW
SELEX
Jolma et al.(2013)
CTCF_1
0.824 0.996
CTCF
M05846_2.00
Homo sapiens
NNNNHBNVCKCCCCCHD

HDGGGGGMGBNVDNNNN
SMiLE-seq
Isakova et al.(2017)
CTCF
0.824 0.996
CTCF
M08289_2.00
Homo sapiens
VGCGCCMCCTVSHGG

CCDSBAGGKGGCGCB
ChIP-seq
Schmitges et al.(2016)
P49711_3-7.RCADE
0.824 0.996
CTCF
M07550_2.00
Homo sapiens
SYGCCMYCTDSTGGH

DCCASHAGRKGGCRS
ChIP-exo
Rhee et al.(2011)
CTCF_1
0.824 0.996
CTCF
M07551_2.00
Homo sapiens
YTTTTDTTTTT

AAAAAHAAAAR
ChIP-exo
Rhee et al.(2011)
CTCF_2
0.824 0.996
CTCF
M07552_2.00
Homo sapiens
AVACAGARDTCCHYTSTGT

ACASARDGGAHYTCTGTBT
ChIP-exo
Rhee et al.(2011)
CTCF_3
0.824 0.996
CTCF
M08087_2.00
Homo sapiens
BRSYGCCMYCTRSTGGYNR

YNRCCASYAGRKGGCRSYV
ChIP-seq
Mathelier et al.(2014)
MA0139.1
0.824 0.996
CTCF
M07862_2.00
Homo sapiens
VBRSYGCCMYCTRSYGGHNVN

NBNDCCRSYAGRKGGCRSYVB
ChIP-seq
Gerstein et al.(2012)
A549_CTCF_HudsonAlpha
0.824 0.996
CTCF
M07863_2.00
Homo sapiens
BRSYGCCMYCTRSYGG

CCRSYAGRKGGCRSYV
ChIP-seq
Gerstein et al.(2012)
AG04449_CTCF_UW
0.824 0.996
CTCF
M07864_2.00
Homo sapiens
RSYGCCMYCTRSTGG

CCASYAGRKGGCRSY
ChIP-seq
Gerstein et al.(2012)
AG04450_CTCF_UW
0.824 0.996
CTCF
M07865_2.00
Homo sapiens
VBRSYGCCMYCTRSTG

CASYAGRKGGCRSYVB
ChIP-seq
Gerstein et al.(2012)
AG09309_CTCF_UW
0.824 0.996
CTCF
M07866_2.00
Homo sapiens
SYGCCMYCTRSTGGY

RCCASYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
AG09319_CTCF_UW
0.824 0.996
CTCF
M07867_2.00
Homo sapiens
GCCMYCTDSTGGH

DCCASHAGRKGGC
ChIP-seq
Gerstein et al.(2012)
AG10803_CTCF_UW
0.824 0.996
CTCF
M07868_2.00
Homo sapiens
SYGCCMYCTRSTGGY

RCCASYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
AoAF_CTCF_UW
0.824 0.996
CTCF
M07869_2.00
Homo sapiens
SYGCCMYCTRSYGGY

RCCRSYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
BJ_CTCF_UW
0.824 0.996
CTCF
M07870_2.00
Homo sapiens
SYGCCMYCTRSTGGY

RCCASYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
Caco-2_CTCF_UW
0.824 0.996
CTCF
M07871_2.00
Homo sapiens
GCCMYCTRSTGGYVR

YBRCCASYAGRKGGC
ChIP-seq
Gerstein et al.(2012)
Fibrobl_CTCF_UT-A
0.824 0.996
CTCF
M07872_2.00
Homo sapiens
RSYGCCMYCTRSTGG

CCASYAGRKGGCRSY
ChIP-seq
Gerstein et al.(2012)
Gliobla_CTCF_UT-A
0.824 0.996
CTCF
M07873_2.00
Homo sapiens
BNNBRSYGCCMYCTRSYGGYN

NRCCRSYAGRKGGCRSYVNNV
ChIP-seq
Gerstein et al.(2012)
GM06990_CTCF_UW
0.824 0.996
CTCF
M07874_2.00
Homo sapiens
RSYGCCMYCTRSYGG

CCRSYAGRKGGCRSY
ChIP-seq
Gerstein et al.(2012)
GM12864_CTCF_UW
0.824 0.996
CTCF
M07875_2.00
Homo sapiens
SYGCCMYCTRSYGGY

RCCRSYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
GM12865_CTCF_UW
0.824 0.996
CTCF
M07876_2.00
Homo sapiens
SYGCCMYCTRSYGGY

RCCRSYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
GM12872_CTCF_UW
0.824 0.996
CTCF
M07877_2.00
Homo sapiens
RSYGCCMYCTRSYGG

CCRSYAGRKGGCRSY
ChIP-seq
Gerstein et al.(2012)
GM12873_CTCF_UW
0.824 0.996
CTCF
M07878_2.00
Homo sapiens
SYGCCMYCTRSYGGY

RCCRSYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
GM12874_CTCF_UW
0.824 0.996
CTCF
M07879_2.00
Homo sapiens
SYGCCMYCTRSYGGY

RCCRSYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
GM12875_CTCF_UW
0.824 0.996
CTCF
M07880_2.00
Homo sapiens
GCCMYCTRSTGGYNR

YNRCCASYAGRKGGC
ChIP-seq
Gerstein et al.(2012)
GM12878_CTCF_Broad
0.824 0.996
CTCF
M07881_2.00
Homo sapiens
YGCCMYCTRSTGGHN

NDCCASYAGRKGGCR
ChIP-seq
Gerstein et al.(2012)
GM12878_CTCF_Stanford
0.824 0.996
CTCF
M07882_2.00
Homo sapiens
YGCCMYCTRSTG

CASYAGRKGGCR
ChIP-seq
Gerstein et al.(2012)
GM12878_CTCF_UT-A
0.824 0.996
CTCF
M07883_2.00
Homo sapiens
BRSYGCCMYCTRSTGGY

RCCASYAGRKGGCRSYV
ChIP-seq
Gerstein et al.(2012)
GM12878_CTCF_UW
0.824 0.996
CTCF
M07884_2.00
Homo sapiens
SYGCCMYCTRSTGGH

DCCASYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
H1-hESC_CTCF_Broad
0.824 0.996
CTCF
M07885_2.00
Homo sapiens
SYGCCMYCTRSYGGH

DCCRSYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
H1-hESC_CTCF_HudsonAlpha
0.824 0.996
CTCF
M07886_2.00
Homo sapiens
SYGCCMYCTRSTGGY

RCCASYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
HA-sp_CTCF_UW
0.824 0.996
CTCF
M07887_2.00
Homo sapiens
RSYGCCMYCTDSTGGYNR

YNRCCASHAGRKGGCRSY
ChIP-seq
Gerstein et al.(2012)
HBMEC_CTCF_UW
0.824 0.996
CTCF
M07888_2.00
Homo sapiens
YGCCMYCTRSTGGYN

NRCCASYAGRKGGCR
ChIP-seq
Gerstein et al.(2012)
HCFaa_CTCF_UW
0.824 0.996
CTCF
M07889_2.00
Homo sapiens
YGCCMYCTDSTGGY

RCCASHAGRKGGCR
ChIP-seq
Gerstein et al.(2012)
HCPEpiC_CTCF_UW
0.824 0.996
CTCF
M07890_2.00
Homo sapiens
YGCCMYCTRSTGG

CCASYAGRKGGCR
ChIP-seq
Gerstein et al.(2012)
HEEpiC_CTCF_UW
0.824 0.996
CTCF
M07891_2.00
Homo sapiens
RSYGCCMYCTRSTGGYNR

YNRCCASYAGRKGGCRSY
ChIP-seq
Gerstein et al.(2012)
HEK293_CTCF_UW
0.824 0.996
CTCF
M07892_2.00
Homo sapiens
DSYGCCMYCTRSTGG

CCASYAGRKGGCRSH
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CTCF_Broad
0.824 0.996
CTCF
M07893_2.00
Homo sapiens
SYGCCMYCTRSTGGY

RCCASYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CTCF_UT-A
0.824 0.996
CTCF
M07894_2.00
Homo sapiens
VBRSYGCCMYCTRSYGG

CCRSYAGRKGGCRSYVB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CTCF_UW
0.824 0.996
CTCF
M07895_2.00
Homo sapiens
VBRSYGCCMYCTRSTGGY

RCCASYAGRKGGCRSYVB
ChIP-seq
Gerstein et al.(2012)
HepG2_CTCF_Broad
0.824 0.996
CTCF
M07896_2.00
Homo sapiens
RSYGCCMYCTRSTGG

CCASYAGRKGGCRSY
ChIP-seq
Gerstein et al.(2012)
HepG2_CTCF_HudsonAlpha
0.824 0.996
CTCF
M07897_2.00
Homo sapiens
RSYGCCMYCTDSTGG

CCASHAGRKGGCRSY
ChIP-seq
Gerstein et al.(2012)
HepG2_CTCF_UT-A
0.824 0.996
CTCF
M07898_2.00
Homo sapiens
YGCCMYCTRSTGGY

RCCASYAGRKGGCR
ChIP-seq
Gerstein et al.(2012)
HepG2_CTCF_UW
0.824 0.996
CTCF
M07899_2.00
Homo sapiens
VBRSYGCCMYCTRSTGGYNR

YNRCCASYAGRKGGCRSYVB
ChIP-seq
Gerstein et al.(2012)
HMEC_CTCF_Broad
0.824 0.996
CTCF
M07900_2.00
Homo sapiens
VBRSYGCCMYCTRSTGG

CCASYAGRKGGCRSYVB
ChIP-seq
Gerstein et al.(2012)
HMEC_CTCF_UW
0.824 0.996
CTCF
M07901_2.00
Homo sapiens
CCMYCTRSTGG

CCASYAGRKGG
ChIP-seq
Gerstein et al.(2012)
HMF_CTCF_UW
0.824 0.996
CTCF
M07902_2.00
Homo sapiens
RSYGCCMYCTRSTGG

CCASYAGRKGGCRSY
ChIP-seq
Gerstein et al.(2012)
HPAF_CTCF_UW
0.824 0.996
CTCF
M07903_2.00
Homo sapiens
YGCCMYCTDSTGG

CCASHAGRKGGCR
ChIP-seq
Gerstein et al.(2012)
HPF_CTCF_UW
0.824 0.996
CTCF
M07904_2.00
Homo sapiens
SYGCCMYCTRSTGGY

RCCASYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
HRE_CTCF_UW
0.824 0.996
CTCF
M07905_2.00
Homo sapiens
YGCCMYCTRSTG

CASYAGRKGGCR
ChIP-seq
Gerstein et al.(2012)
HRPEpiC_CTCF_UW
0.824 0.996
CTCF
M07906_2.00
Homo sapiens
NNBRSYGCCMYCTDSTGG

CCASHAGRKGGCRSYVNN
ChIP-seq
Gerstein et al.(2012)
HSMM_CTCF_Broad
0.824 0.996
CTCF
M07907_2.00
Homo sapiens
BRSYGCCMYCTDSTGGYN

NRCCASHAGRKGGCRSYV
ChIP-seq
Gerstein et al.(2012)
HSMMtube_CTCF_Broad
0.824 0.996
CTCF
M07908_2.00
Homo sapiens
NVBRSYGCCMYCTRSYGGYNV

BNRCCRSYAGRKGGCRSYVBN
ChIP-seq
Gerstein et al.(2012)
HUVEC_CTCF_Broad
0.824 0.996
CTCF
M07909_2.00
Homo sapiens
RSYRCCMYCTRSTGG

CCASYAGRKGGYRSY
ChIP-seq
Gerstein et al.(2012)
HUVEC_CTCF_UT-A
0.824 0.996
CTCF
M07910_2.00
Homo sapiens
BNVBRSYGCCMYCTRSYGGH

DCCRSYAGRKGGCRSYVBNV
ChIP-seq
Gerstein et al.(2012)
HUVEC_CTCF_UW
0.824 0.996
CTCF
M07911_2.00
Homo sapiens
RSYGCCMYCTRSYGGYNR

YNRCCRSYAGRKGGCRSY
ChIP-seq
Gerstein et al.(2012)
K562_CTCF_Broad
0.824 0.996
CTCF
M07912_2.00
Homo sapiens
SYGCCMYCTDSTGGY

RCCASHAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
K562_CTCF_UT-A
0.824 0.996
CTCF
M07913_2.00
Homo sapiens
SYGCCMYCTRSYGGY

RCCRSYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
K562_CTCF_UW
0.824 0.996
CTCF
M07914_2.00
Homo sapiens
SYGCCMYCTRSTGGH

DCCASYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
MCF-7_CTCF_UT-A
0.824 0.996
CTCF
M07915_2.00
Homo sapiens
BRSYGCCMYCTDSTGGYNRNN

NNYNRCCASHAGRKGGCRSYV
ChIP-seq
Gerstein et al.(2012)
NH-A_CTCF_Broad
0.824 0.996
CTCF
M07916_2.00
Homo sapiens
BRSYGCCMYCTDSTGGY

RCCASHAGRKGGCRSYV
ChIP-seq
Gerstein et al.(2012)
NHDF-Ad_CTCF_Broad
0.824 0.996
CTCF
M07917_2.00
Homo sapiens
SYGCCMYCTRSTGGH

DCCASYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
NHEK_CTCF_Broad
0.824 0.996
CTCF
M07918_2.00
Homo sapiens
SYGCCMYCTRSYGG

CCRSYAGRKGGCRS
ChIP-seq
Gerstein et al.(2012)
NHEK_CTCF_UW
0.824 0.996
CTCF
M07919_2.00
Homo sapiens
RSYGCCMYCTRSTGG

CCASYAGRKGGCRSY
ChIP-seq
Gerstein et al.(2012)
NHLF_CTCF_Broad
0.824 0.996
CTCF
M07920_2.00
Homo sapiens
DSYGCCMYCTDSTGGYNR

YNRCCASHAGRKGGCRSH
ChIP-seq
Gerstein et al.(2012)
Osteobl_CTCF_Broad
0.824 0.996
CTCF
M07921_2.00
Homo sapiens
YGCCMYCTRSTGGYV

BRCCASYAGRKGGCR
ChIP-seq
Gerstein et al.(2012)
ProgFib_CTCF_UT-A
0.824 0.996
CTCF
M07922_2.00
Homo sapiens
YGCCMYCTRSYGG

CCRSYAGRKGGCR
ChIP-seq
Gerstein et al.(2012)
SAEC_CTCF_UW
0.824 0.996
CTCF
M07923_2.00
Homo sapiens
YGCCMYCTRSTGGYN

NRCCASYAGRKGGCR
ChIP-seq
Gerstein et al.(2012)
SK-N-SH_RA_UW
0.824 0.996
CTCF
M07924_2.00
Homo sapiens
RSYGCCMYCTRSTGG

CCASYAGRKGGCRSY
ChIP-seq
Gerstein et al.(2012)
T-47D_CTCF_HudsonAlpha
0.824 0.996
CTCF
M07925_2.00
Homo sapiens
RSYGCCMYCTRSTGG

CCASYAGRKGGCRSY
ChIP-seq
Gerstein et al.(2012)
WERI-Rb-1_CTCF_UW
0.824 0.996
Ctcf
M08022_2.00
Mus musculus
RSYGCCMYCTDSTGG

CCASHAGRKGGCRSY
ChIP-seq
Chen et al.(2011)
SRP000217_Ctcf
0.824 0.996
CTCF
M08869_2.00
Homo sapiens
BRSYGCCMYCTRSYGGYNR

YNRCCRSYAGRKGGCRSYV
Misc
Kulakovskiy et al.(2013)
CTCF_HUMAN.H11MO.0.A
0.824 0.996
Ctcf
M08966_2.00
Mus musculus
VBRSYGCCMYCTRSYGGYNR

YNRCCRSYAGRKGGCRSYVB
Misc
Kulakovskiy et al.(2013)
CTCF_MOUSE.H11MO.0.A
0.824 0.996
CTCF
M09503_2.00
Homo sapiens
NBRSYGCCMYCTRSTGGHHR

YDDCCASYAGRKGGCRSYVN
Misc
Heinz et al.(2010)
CD4+-CTCF_Barski_et_al._1
0.824 0.996
CTCF
M09504_2.00
Homo sapiens
TGCAGTDCCNVNNNYDRCCA

TGGYHRNNNBNGGHACTGCA
Misc
Heinz et al.(2010)
CD4+-CTCF_Barski_et_al._2
0.824 0.996
CTCF
M10152_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CTCF_01
0.824 0.996
CTCF
M10153_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CTCF_02
0.824 0.996
CTCF
M10154_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CTCF_05
0.824 0.996
CTCF
M10155_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CTCF_06
0.824 0.996
CTCF
M10156_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CTCF_07
0.824 0.996
CTCF
M10157_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CTCF_08
0.824 0.996
CTCF
M10158_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CTCF_10
0.824 0.996
CTCF
M10159_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CTCF_Q3_01
0.824 0.996
CTCF
M08238_2.00
Homo sapiens
GCGCCCYCTGSYGGY

RCCRSCAGRGGGCGC
ChIP-seq
Najafabadi et al.(2015b)
CTCF
0.824 0.996
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R013354 C2H2 ZF 266 288
Tal_R013354 C2H2 ZF 294 316
Tal_R013354 C2H2 ZF 322 345
Tal_R013354 C2H2 ZF 351 373
Tal_R013354 C2H2 ZF 379 401
Tal_R013354 C2H2 ZF 407 430
Tal_R013354 C2H2 ZF 437 460
Tal_R013354 C2H2 ZF 467 489
Tal_R013354 C2H2 ZF 495 517
Tal_R013354 C2H2 ZF 523 546
Tal_R013354 C2H2 ZF 555 575

Links

Other C2H2 ZF family TFs
Other Tyto alba TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000016451 Ailuropoda melanoleuca ENSAMEG00000016451 N 0.000
ENSAPLG00000015265 Anas platyrhynchos ENSAPLG00000015265 N 0.000
THAP4 Anolis carolinensis ENSACAG00000000876 N 0.000
Afo_R013743 Aptenodytes forsteri Afo_R013743 N 0.000
ENSP00000385006-D1 Bos grunniens ENSP00000385006-D1 N 0.000
THAP4 Bos taurus ENSBTAG00000013253 N 0.000
Brh_R002873 Buceros rhinoceros Brh_R002873 N 0.000
THAP4 Callithrix jacchus ENSCJAG00000000540 N 0.000
Aan_R015941 Calypte anna Aan_R015941 N 0.000
THAP4 Canis familiaris ENSCAFG00000013012 N 0.000
THAP4 Cavia porcellus ENSCPOG00000022107 N 0.000
ENSCSAG00000005755 Chlorocebus sabaeus ENSCSAG00000005755 N 0.000
THAP4 Choloepus hoffmanni ENSCHOG00000003231 N 0.000
THAP4 Echinops telfairi ENSETEG00000009284 N 0.000
THAP4 Equus caballus ENSECAG00000000252 N 0.000
THAP4 Erinaceus europaeus ENSEEUG00000008009 N 0.000
THAP4 Felis catus ENSFCAG00000014280 N 0.000
ENSFALG00000003312 Ficedula albicollis ENSFALG00000003312 N 0.000
THAP4 Gallus gallus ENSGALG00000006283 N 0.000
Gfo_R001811 Geospiza fortis Gfo_R001811 N 0.000
THAP4 Gorilla gorilla ENSGGOG00000015684 N 0.000
THAP4 Homo sapiens ENSG00000176946 N 0.000
ENSSTOG00000015998 Ictidomys tridecemlineatus ENSSTOG00000015998 N 0.000
THAP4 Loxodonta africana ENSLAFG00000018001 N 0.000
ENSP00000385006 Macaca fascicularis ENSP00000385006 N 0.000
THAP4 Macaca mulatta ENSMMUG00000005662 N 0.000
ENSMEUG00000013235 Macropus eugenii ENSMEUG00000013235 N 0.000
THAP4 Microcebus murinus ENSMICG00000016452 N 0.000
ENSMPUG00000000182 Mustela putorius furo ENSMPUG00000000182 N 0.000
Thap4 Mus musculus ENSMUSG00000026279 N 0.000
THAP4 Myotis lucifugus ENSMLUG00000007192 N 0.000
ENSNLEG00000007765 Nomascus leucogenys ENSNLEG00000007765 N 0.000
THAP4 Ornithorhynchus anatinus ENSOANG00000009842 N 0.000
THAP4 Oryctolagus cuniculus ENSOCUG00000011164 N 0.000
THAP4 Otolemur garnettii ENSOGAG00000024821 N 0.000
ENSOARG00000017642 Ovis aries ENSOARG00000017642 N 0.000
THAP4 Pan troglodytes ENSPTRG00000013127 N 0.000
ENSPANG00000020992 Papio anubis ENSPANG00000020992 N 0.000
ENSPSIG00000006771 Pelodiscus sinensis ENSPSIG00000006771 N 0.000
Pvit_12887 Pogona vitticeps Pvit_12887 N 0.000
ENSPPYG00000013356 Pongo abelii ENSPPYG00000013356 N 0.000
THAP4 Procavia capensis ENSPCAG00000003695 N 0.000
THAP4 Pteropus vampyrus ENSPVAG00000016841 N 0.000
Thap4 Rattus norvegicus ENSRNOG00000018351 N 0.000
ENSSHAG00000002590 Sarcophilus harrisii ENSSHAG00000002590 N 0.000
THAP4 Taeniopygia guttata ENSTGUG00000005955 N 0.000
ENSTSYG00000002410 Tarsius syrichta ENSTSYG00000002410 N 0.000
THAP4 Tupaia belangeri ENSTBEG00000003154 N 0.000
THAP4 Tursiops truncatus ENSTTRG00000017281 N 0.000