cassava20557.m1 (Manihot esculenta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 cassava20557.m1 T137835_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava20557.m1 C2H2 ZF 14 35
cassava20557.m1 C2H2 ZF 36 59

Links

Other C2H2 ZF family TFs
Other Manihot esculenta TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_19799 Aegilops tauschii F775_19799 N 0.803
AMTR_s00011p00256770 Amborella trichopoda AMTR_s00011p00256770 N 0.827
Aquca_030_00311 Aquilegia coerulea Aquca_030_00311 N 0.827
BRADI4G38000 Brachypodium distachyon BRADI4G38000 N 0.803
evm.TU.supercontig_30.114 Carica papaya evm.TU.supercontig_30.114 N 0.827
Cla010033 Citrullus lanatus Cla010033 N 0.807
Ciclev10015448m.g Citrus clementina Ciclev10015448m.g N 0.827
orange1.1g015397m.g Citrus sinensis orange1.1g015397m.g N 0.827
Cucsa.048660 Cucumis sativus Cucsa.048660 N 0.807
gene19969-v1.0-hybrid Fragaria vesca gene19969-v1.0-hybrid N 0.827
GLYMA05G34280 Glycine max GLYMA05G34280 N 0.827
GLYMA08G05390 Glycine max GLYMA08G05390 N 0.827
Gorai.008G050900 Gossypium raimondii Gorai.008G050900 N 0.827
MLOC_57580 Hordeum vulgare MLOC_57580 N 0.803
LPERR09G15520 Leersia perrieri LPERR09G15520 N 0.803
Lus10038373.g Linum usitatissimum Lus10038373.g N 0.807
Lus10036234.g Linum usitatissimum Lus10036234.g N 0.807
chr4.CM0042.1850.nd Lotus japonicus chr4.CM0042.1850.nd N 0.807
mgf015709m Mimulus guttatus mgf015709m N 0.827
mgf015174m Mimulus guttatus mgf015174m N 0.827
mgf011479m Mimulus guttatus mgf011479m N 0.827
GSMUA_Achr11G18180_001 Musa acuminata GSMUA_Achr11G18180_001 N 0.827
GSMUA_Achr11G13680_001 Musa acuminata GSMUA_Achr11G13680_001 N 0.827
GSMUA_Achr10G20960_001 Musa acuminata GSMUA_Achr10G20960_001 N 0.827
OBART09G19610 Oryza barthii OBART09G19610 N 0.803
OB09G26240 Oryza brachyantha OB09G26240 N 0.803
ORGLA09G0158300 Oryza glaberrima ORGLA09G0158300 N 0.803
BGIOSGA029268 Oryza indica BGIOSGA029268 N 0.803
ONIVA09G20740 Oryza nivara ONIVA09G20740 N 0.803
ORUFI10G16430 Oryza rufipogon ORUFI10G16430 N 0.803
OS09G0560900 Oryza sativa OS09G0560900 N 0.803
POPTR_0003s07180 Populus trichocarpa POPTR_0003s07180 N 0.827
POPTR_0001s16080 Populus trichocarpa POPTR_0001s16080 N 0.827
Pm010813 Prunus mume Pm010813 N 0.827
29994.m000464 Ricinus communis 29994.m000464 N 0.827
SapurV1A.0104s0210 Salix purpurea SapurV1A.0104s0210 N 0.807
SapurV1A.0273s0180 Salix purpurea SapurV1A.0273s0180 N 0.827
SapurV1A.3784s0010 Salix purpurea SapurV1A.3784s0010 N 0.827
Solyc02g081620.2 Solanum lycopersicum Solyc02g081620.2 N 0.827
PGSC0003DMG401017733 Solanum tuberosum PGSC0003DMG401017733 N 0.827
TCM_005999 Theobroma cacao TCM_005999 N 0.827
Traes_5BL_6688D6ECE Triticum aestivum Traes_5BL_6688D6ECE N 0.803
TRIUR3_07451 Triticum urartu TRIUR3_07451 N 0.803
SUF4 Vitis vinifera VIT_01s0011g01240 N 0.807