cassava43667.valid.m1 (Manihot esculenta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 cassava43667.valid.m1 T137880_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.812 0.913
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.799 0.717
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.799 0.696
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.788 0.848
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.782 0.783
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.782 0.783
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.782 0.783
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.782 0.783
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.782 0.783
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.776 0.696
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.760 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava43667.valid.m1 C2H2 ZF 77 99
cassava43667.valid.m1 C2H2 ZF 137 159

Links

Other C2H2 ZF family TFs
Other Manihot esculenta TFs

294 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_052210 Acremonium chrysogenum ACRE_052210 N 0.000
FFUJ_04739 Fusarium fujikuroi FFUJ_04739 N 0.000
FGRRES_09770 Fusarium graminearum FGRRES_09770 N 0.000
FOXG_08297 Fusarium oxysporum FOXG_08297 N 0.000
FPSE_02297 Fusarium pseudograminearum FPSE_02297 N 0.000
NechaG91043 Fusarium solani NechaG91043 N 0.000
MGU_01057 Metarhizium guizhouense MGU_01057 N 0.000
MAJ_01848 Metarhizium majus MAJ_01848 N 0.000
X797_005188 Metarhizium robertsii X797_005188 N 0.000
fgenesh1_pm.sca_18_chr2_1_0000447 Nectria haematococca fgenesh1_pm.sca_18_chr2_1_0000447 N 0.000
S40285_02819 Stachybotrys chlorohalonata S40285_02819 N 0.000
TRIATDRAFT_181530 Trichoderma atroviride TRIATDRAFT_181530 N 0.000
TRIREDRAFT_25244 Trichoderma reesei TRIREDRAFT_25244 N 0.000
TRIVIDRAFT_113002 Trichoderma virens TRIVIDRAFT_113002 N 0.000