Cucsa.079940 (Cucumis sativus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cucsa.079940 T137907_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.821 0.956
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.821 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.079940.1 C2H2 ZF 339 368
Cucsa.079940.1 C2H2 ZF 367 398

Links

Other C2H2 ZF family TFs
Other Cucumis sativus TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001903 Acyrthosiphon pisum ACYPI001903 I 0.000
ENSAMEG00000001098 Ailuropoda melanoleuca ENSAMEG00000001098 I 0.000
Alligator_sinensis_CCG022145.1 Alligator sinensis Alligator_sinensis_CCG022145.1 I 0.000
ENSACAG00000008549 Anolis carolinensis ENSACAG00000008549 I 0.000
GB55445 Apis mellifera GB55445 I 0.000
ENSAMXG00000020444 Astyanax mexicanus ENSAMXG00000020444 I 0.000
ENSBTAP00000015683-D1 Bos grunniens ENSBTAP00000015683-D1 I 0.000
ENSP00000331791-D2 Bos grunniens ENSP00000331791-D2 I 0.000
TBX10 Bos taurus ENSBTAG00000011816 I 0.000
fgenesh2_kg.scaffold_118000001 Branchiostoma floridae fgenesh2_kg.scaffold_118000001 I 0.000
TBX1 Callithrix jacchus ENSCJAG00000014591 I 0.000
Aan_R010744 Calypte anna Aan_R010744 I 0.000
Cflo_09868--XP_624689.2_APIME Camponotus floridanus Cflo_09868--XP_624689.2_APIME I 0.000
TBX10 Canis familiaris ENSCAFG00000011264 I 0.000
CapteG226618 Capitella teleta CapteG226618 I 0.000
ENSCSAG00000008726 Chlorocebus sabaeus ENSCSAG00000008726 I 0.000
ENSCSAG00000011818 Chlorocebus sabaeus ENSCSAG00000011818 I 0.000
ENSCSAVG00000000786 Ciona savignyi ENSCSAVG00000000786 I 0.000
CGI_10008753 Crassostrea gigas CGI_10008753 I 0.000
tbx1 Danio rerio ENSDARG00000031891 I 0.000
DAPPUDRAFT_3881 Daphnia pulex DAPPUDRAFT_3881 I 0.000
TBX1 Dasypus novemcinctus ENSDNOG00000035422 I 0.000
YQE_10853 Dendroctonus ponderosae YQE_10853 I 0.000
Tbx10 Dipodomys ordii ENSDORG00000010070 I 0.000
TBX10 Felis catus ENSFCAG00000001760 I 0.000
ENSFCAG00000005446 Felis catus ENSFCAG00000005446 I 0.000
ENSFALG00000008041 Ficedula albicollis ENSFALG00000008041 I 0.000
ENSGMOG00000018613 Gadus morhua ENSGMOG00000018613 I 0.000
ENSGALG00000003599 Gallus gallus ENSGALG00000003599 I 0.000
tbx1 Gasterosteus aculeatus ENSGACG00000013057 I 0.000
ENSGGOG00000009181 Gorilla gorilla ENSGGOG00000009181 I 0.000
TBX10 Gorilla gorilla ENSGGOG00000011961 I 0.000
Hsal_04471--XP_624689.2_APIME Harpegnathos saltator Hsal_04471--XP_624689.2_APIME I 0.000
TBX10 Homo sapiens ENSG00000167800 I 0.000
TBX1 Homo sapiens ENSG00000184058 D 0.000
ENSSTOG00000004505 Ictidomys tridecemlineatus ENSSTOG00000004505 I 0.000
ENSSTOG00000011629 Ictidomys tridecemlineatus ENSSTOG00000011629 I 0.000
ENSLACG00000016333 Latimeria chalumnae ENSLACG00000016333 I 0.000
ENSLACG00000004994 Latimeria chalumnae ENSLACG00000004994 I 0.000
LDEC008541 Leptinotarsa decemlineata LDEC008541 I 0.000
LotgiG104372 Lottia gigantea LotgiG104372 I 0.000
TBX1 Loxodonta africana ENSLAFG00000021555 I 0.000
ENSP00000335191 Macaca fascicularis ENSP00000335191 I 0.000
ENSMMUG00000018529 Macaca mulatta ENSMMUG00000018529 I 0.000
ENSMEUG00000011624 Macropus eugenii ENSMEUG00000011624 I 0.000
ENSMEUG00000007568 Macropus eugenii ENSMEUG00000007568 I 0.000
ENSMGAG00000004357 Meleagris gallopavo ENSMGAG00000004357 I 0.000
TBX10 Monodelphis domestica ENSMODG00000021334 I 0.000
TBX1 Monodelphis domestica ENSMODG00000021176 I 0.000
ENSMPUG00000004076 Mustela putorius furo ENSMPUG00000004076 I 0.000
ENSMPUG00000003900 Mustela putorius furo ENSMPUG00000003900 I 0.000
Tbx1 Mus musculus ENSMUSG00000009097 D 0.000
Tbx10 Mus musculus ENSMUSG00000037477 I 0.000
Myotis_brandtii_Tbx10_10030825 Myotis brandtii Myotis_brandtii_Tbx10_10030825 I 0.000
Myotis_brandtii_Tbx1_10021844 Myotis brandtii Myotis_brandtii_Tbx1_10021844 I 0.000
NV11904 Nasonia vitripennis NV11904 I 0.000
Ogr08509 Ophisaurus gracilis Ogr08509 I 0.000
ENSONIG00000015827 Oreochromis niloticus ENSONIG00000015827 I 0.000
tbx1 Oryzias latipes ENSORLG00000015256 I 0.000
TBX1 Otolemur garnettii ENSOGAG00000003596 I 0.000
TBX10 Otolemur garnettii ENSOGAG00000000784 I 0.000
ENSOARG00000013751 Ovis aries ENSOARG00000013751 I 0.000
TBX10 Pan troglodytes ENSPTRG00000003972 I 0.000
ENSPANG00000006501 Papio anubis ENSPANG00000006501 I 0.000
ENSPANG00000015763 Papio anubis ENSPANG00000015763 I 0.000
PHUM607490 Pediculus humanus PHUM607490 I 0.000
ENSPFOG00000009540 Poecilia formosa ENSPFOG00000009540 I 0.000
ENSPFOG00000009621 Poecilia formosa ENSPFOG00000009621 I 0.000
Pvit_15846 Pogona vitticeps Pvit_15846 I 0.000
Pvit_16222 Pogona vitticeps Pvit_16222 I 0.000
TBX10 Procavia capensis ENSPCAG00000009585 I 0.000
TBX10 Pteropus vampyrus ENSPVAG00000008592 I 0.000
Tbx1 Rattus norvegicus ENSRNOG00000001892 I 0.000
Tbx10 Rattus norvegicus ENSRNOG00000017944 I 0.000
Sakowv30001714m.g Saccoglossus kowalevskii Sakowv30001714m.g I 0.000
SMAR009230 Strigamia maritima SMAR009230 I 0.000
ENSTGUG00000007382 Taeniopygia guttata ENSTGUG00000007382 I 0.000
TBX1 Taeniopygia guttata ENSTGUG00000008395 I 0.000
tbx1 Takifugu rubripes ENSTRUG00000014017 I 0.000
tetur04g00890 Tetranychus urticae tetur04g00890 I 0.000
tbx1 Tetraodon nigroviridis ENSTNIG00000016767 I 0.000
TC015327 Tribolium castaneum TC015327 I 0.000
tbx1.S Xenopus laevis XB-GENE-6254396 I 0.000
tbx1.L Xenopus laevis XB-GENE-478088 I 0.000
tbx1 Xenopus tropicalis XB-GENE-478084 I 0.000
L798_01101 Zootermopsis nevadensis L798_01101 I 0.000