CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.10.697.1
(
Nectria haematococca
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw1.10.697.1
T137976_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06487
M01197_2.00
Neurospora crassa
NBMGCCKCNN
NNGMGGCKVN
PBM
Lambert et al.(2019)
pTH10205
0.823
0.928
NCU06487
M01887_2.00
Neurospora crassa
NBAGCCKCRH
DYGMGGCTVN
PBM
Weirauch et al.(2014)
pTH8951
0.823
0.928
XP_001540939.1
M01188_2.00
Histoplasma capsulatum
NBAGCCKCNN
NNGMGGCTVN
PBM
Lambert et al.(2019)
pTH11147
0.793
0.884
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.10.697.1
C2H2 ZF
353
378
YVCNFAGCTALPFQTQYLLNSHANVH
e_gw1.10.697.1
C2H2 ZF
384
413
HYCPVKGCPRSEGGKGFKRKNEMIRHGLVH
e_gw1.10.697.1
C2H2 ZF
418
444
YVCPFCPDREHKYPRPDNLQRHVRVHH
Links
Other
C2H2 ZF
family TFs
Other
Nectria haematococca
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GF18381
Drosophila ananassae
FBgn0095399
N
GG18266
Drosophila erecta
FBgn0110482
N
CG14710
Drosophila melanogaster
FBgn0037920
N
GM23957
Drosophila sechellia
FBgn0178822
N
GD18767
Drosophila simulans
FBgn0190287
N