estExt_fgenesh1_pg.C_sca_2_chr3_3_00476 (Nectria haematococca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh1_pg.C_sca_2_chr3_3_00476 T138552_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03975
M01879_2.00 		Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN		 PBM
Weirauch et al.(2014)
pTH9677 		0.792 0.913
HCBG_04116
M01448_2.00 		Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY		 PBM
Najafabadi et al.(2015a)
pTH11149 		0.787 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_sca_2_chr3_3_00476 C2H2 ZF 110 132
estExt_fgenesh1_pg.C_sca_2_chr3_3_00476 C2H2 ZF 138 162
estExt_fgenesh1_pg.C_sca_2_chr3_3_00476 C2H2 ZF 168 190
estExt_fgenesh1_pg.C_sca_2_chr3_3_00476 C2H2 ZF 196 220

Links

Other C2H2 ZF family TFs
Other Nectria haematococca TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000003939 Ailuropoda melanoleuca ENSAMEG00000003939 I 0.000
Alligator_sinensis_CCG020800.1 Alligator sinensis Alligator_sinensis_CCG020800.1 I 0.000
NEUROD2 Anolis carolinensis ENSACAG00000017561 I 0.000
Afo_R010307 Aptenodytes forsteri Afo_R010307 I 0.000
ENSAMXG00000024826 Astyanax mexicanus ENSAMXG00000024826 I 0.000
BGLB013872 Biomphalaria glabrata BGLB013872 I 0.000
ENSBTAP00000005381-D1 Bos grunniens ENSBTAP00000005381-D1 I 0.000
NEUROD2 Bos taurus ENSBTAG00000004119 I 0.000
NEUROD2 Callithrix jacchus ENSCJAG00000008704 I 0.000
Aan_R006139 Calypte anna Aan_R006139 I 0.000
NEUROD2 Canis familiaris ENSCAFG00000016407 I 0.000
ENSCPOG00000002240 Cavia porcellus ENSCPOG00000002240 I 0.000
Cmyd_10015861 Chelonia mydas Cmyd_10015861 I 0.000
ENSCSAG00000019039 Chlorocebus sabaeus ENSCSAG00000019039 I 0.000
neurod2 Danio rerio ENSDARG00000016854 I 0.000
NEUROD2 Dasypus novemcinctus ENSDNOG00000013872 I 0.000
NEUROD2 Equus caballus ENSECAG00000020811 I 0.000
NEUROD2 Felis catus ENSFCAG00000027653 I 0.000
ENSFALG00000000552 Ficedula albicollis ENSFALG00000000552 I 0.000
ENSGMOG00000000168 Gadus morhua ENSGMOG00000000168 I 0.000
ENSGMOG00000007437 Gadus morhua ENSGMOG00000007437 I 0.000
ENSGALG00000028276 Gallus gallus ENSGALG00000028276 I 0.000
NEUROD2 Gasterosteus aculeatus ENSGACG00000008918 I 0.000
neurod2 Gasterosteus aculeatus ENSGACG00000006028 I 0.000
Gfo_R016263 Geospiza fortis Gfo_R016263 I 0.000
NEUROD2 Gorilla gorilla ENSGGOG00000000493 I 0.000
NEUROD2 Homo sapiens ENSG00000171532 D 0.000
ENSSTOG00000020820 Ictidomys tridecemlineatus ENSSTOG00000020820 I 0.000
ENSLACG00000016624 Latimeria chalumnae ENSLACG00000016624 I 0.000
ENSLOCG00000017518 Lepisosteus oculatus ENSLOCG00000017518 I 0.000
NEUROD2 Loxodonta africana ENSLAFG00000029558 I 0.000
NEUROD2 Macaca mulatta ENSMMUG00000001404 I 0.000
ENSMPUG00000020084 Mustela putorius furo ENSMPUG00000020084 I 0.000
Neurod2 Mus musculus ENSMUSG00000038255 D 0.000
Myotis_brandtii_Neurod2_10030393 Myotis brandtii Myotis_brandtii_Neurod2_10030393 I 0.000
ENSNLEG00000000900 Nomascus leucogenys ENSNLEG00000000900 I 0.000
NEUROD2 Ochotona princeps ENSOPRG00000013289 I 0.000
Ocbimv22021915m.g Octopus bimaculoides Ocbimv22021915m.g I 0.000
Ogr16176 Ophisaurus gracilis Ogr16176 I 0.000
ENSONIG00000020931 Oreochromis niloticus ENSONIG00000020931 I 0.000
ENSONIG00000020663 Oreochromis niloticus ENSONIG00000020663 I 0.000
NEUROD2 Ornithorhynchus anatinus ENSOANG00000003622 I 0.000
NEUROD2 Oryctolagus cuniculus ENSOCUG00000023536 I 0.000
NEUROD2 Oryzias latipes ENSORLG00000003441 I 0.000
neurod2 Oryzias latipes ENSORLG00000008303 I 0.000
NEUROD2 Otolemur garnettii ENSOGAG00000010543 I 0.000
ENSOARG00000011334 Ovis aries ENSOARG00000011334 I 0.000
NEUROD2 Pan troglodytes ENSPTRG00000009094 I 0.000
ENSPANG00000021818 Papio anubis ENSPANG00000021818 I 0.000
ENSPSIG00000001535 Pelodiscus sinensis ENSPSIG00000001535 I 0.000
ENSPFOG00000019942 Poecilia formosa ENSPFOG00000019942 I 0.000
Pvit_07639 Pogona vitticeps Pvit_07639 I 0.000
ENSPPYG00000008486 Pongo abelii ENSPPYG00000008486 I 0.000
NEUROD2 Pteropus vampyrus ENSPVAG00000008509 I 0.000
NEUROD2 Taeniopygia guttata ENSTGUG00000016747 I 0.000
NEUROD2 Takifugu rubripes ENSTRUG00000016237 I 0.000
neurod2 Takifugu rubripes ENSTRUG00000012238 I 0.000
neurod2 Takifugu rubripes ENSTRUG00000000599 I 0.000
neurod2 Tetraodon nigroviridis ENSTNIG00000001440 I 0.000
NEUROD2 Tetraodon nigroviridis ENSTNIG00000011718 I 0.000
NEUROD2 Tursiops truncatus ENSTTRG00000007210 I 0.000
neurod2 Xenopus tropicalis XB-GENE-1008512 I 0.000
ENSXMAG00000019847 Xiphophorus maculatus ENSXMAG00000019847 I 0.000
ENSXMAG00000019741 Xiphophorus maculatus ENSXMAG00000019741 I 0.000