estExt_fgenesh2_pg.C_1280075 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh2_pg.C_1280075 T138598_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_1280075 C2H2 ZF 619 641
estExt_fgenesh2_pg.C_1280075 C2H2 ZF 647 670
estExt_fgenesh2_pg.C_1280075 C2H2 ZF 700 722
estExt_fgenesh2_pg.C_1280075 C2H2 ZF 734 756
estExt_fgenesh2_pg.C_1280075 C2H2 ZF 1320 1342
estExt_fgenesh2_pg.C_1280075 C2H2 ZF 1360 1382

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g09990 Acanthocheilonema viteae nAv.1.0.1.g09990 N
ANCDUO_23123 Ancylostoma duodenale ANCDUO_23123 N
ALUE_0000443201 Ascaris lumbricoides ALUE_0000443201 N
ASU_09498 Ascaris suum ASU_09498 N
Bm9299 Brugia malayi Bm9299 N
BTMF_0001646101 Brugia timori BTMF_0001646101 N
CBN10485 Caenorhabditis brenneri CBN10485 N
cebp-2 Caenorhabditis elegans WBGene00016754 N
CJA15011 Caenorhabditis japonica CJA15011 N
CRE29654 Caenorhabditis remanei CRE29654 N
nDi.2.2.2.g04918 Dirofilaria immitis nDi.2.2.2.g04918 N
HCOI00796700 Haemonchus contortus HCOI00796700 N
HPLM_0001243201 Haemonchus placei HPLM_0001243201 N
HPBE_0000922401 Heligmosomoides bakeri HPBE_0000922401 N
Hba_08585 Heterorhabditis bacteriophora Hba_08585 N
nLs.2.1.2.g05791 Litomosoides sigmodontis nLs.2.1.2.g05791 N
LOAG_03829 Loa loa LOAG_03829 N
NECAME_00195 Necator americanus NECAME_00195 N
NBR_0000089501 Nippostrongylus brasiliensis NBR_0000089501 N
OESDEN_17196 Oesophagostomum dentatum OESDEN_17196 N
nOo.2.0.1.g09190 Onchocerca ochengi nOo.2.0.1.g09190 N
WBGene00238092 Onchocerca volvulus WBGene00238092 N
L596_g26851 Steinernema carpocapsae L596_g26851 N
L889_g13736 Steinernema feltiae L889_g13736 N
L893_g3205 Steinernema glaseri L893_g3205 N
L898_g24307 Steinernema monticolum L898_g24307 N
L892_g15981 Steinernema scapterisci L892_g15981 N
SMUV_0000860001 Syphacia muris SMUV_0000860001 N
TELCIR_08516 Teladorsagia circumcincta TELCIR_08516 N
TELCIR_23227 Teladorsagia circumcincta TELCIR_23227 N
TCLT_0000665401 Thelazia callipaeda TCLT_0000665401 N