CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_1440017
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_1440017
T138612_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1440017
C2H2 ZF
504
526
YLCNICGKELQTSGKLRTHLANH
estExt_fgenesh2_pg.C_1440017
C2H2 ZF
532
554
HECPICSAKFGYSNHLADHMRIH
estExt_fgenesh2_pg.C_1440017
C2H2 ZF
560
582
YKCNQCDANFKQKSTLIRHTRRH
estExt_fgenesh2_pg.C_1440017
C2H2 ZF
588
610
YRCSVCNLGFHDTTHLKHHQKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_19748
Aegilops tauschii
F775_19748
N
Traes_3DS_2F11B975C
Triticum aestivum
Traes_3DS_2F11B975C
N