CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_170042
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_170042
T138632_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_170042
C2H2 ZF
604
626
HVCQECGYKAPSNCALVIHMRKH
estExt_fgenesh2_pg.C_170042
C2H2 ZF
632
654
YGCDLCGYRTAYKTSMVAHTMKH
estExt_fgenesh2_pg.C_170042
C2H2 ZF
660
682
YMCGECGYRCVQKGHLTEHMKIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AOL_s00007g91
Arthrobotrys oligospora
AOL_s00007g91
N
e_gw1.00655.2.1
Aspergillus carbonarius
e_gw1.00655.2.1
N
ACLA_057650
Aspergillus clavatus
CADACLAG00005620
N
CADAFLAG00013289
Aspergillus flavus
CADAFLAG00013289
N
AFUA_8G04300
Aspergillus fumigatus
CADAFUAG00003096
N
ANIA_01437
Aspergillus nidulans
CADANIAG00008050
N
CADANGAG00013342
Aspergillus niger
CADANGAG00013342
N
CADAORAG00009979
Aspergillus oryzae
CADAORAG00009979
N
ATEG_00042
Aspergillus terreus
CADATEAG00007804
N
COCC4DRAFT_164256
Bipolaris maydis
COCC4DRAFT_164256
N
COCMIDRAFT_7036
Bipolaris oryzae
COCMIDRAFT_7036
N
COCSADRAFT_335315
Bipolaris sorokiniana
COCSADRAFT_335315
N
COCVIDRAFT_38938
Bipolaris victoriae
COCVIDRAFT_38938
N
COCCADRAFT_7074
Bipolaris zeicola
COCCADRAFT_7074
N
estExt_fgenesh1_pg.C_30009
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_30009
N
W97_01292
Coniosporium apollinis
W97_01292
N
DRE_00940
Drechslerella stenobrocha
DRE_00940
N
EPUS_05648
Endocarpon pusillum
EPUS_05648
N
LEMA_P028490.1
Leptosphaeria maculans
LEMA_P028490.1
N
NFIA_097020
Neosartorya fischeri
CADNFIAG00009216
N
PABG_00059
Paracoccidioides brasiliensis
PABG_00059
N
PAAG_04696
Paracoccidioides sp lutzii
PAAG_04696
N
Pc21g11080
Penicillium chrysogenum
Pc21g11080
N
PDIP_57090
Penicillium digitatum
PDIP_57090
N
PITC_050900
Penicillium italicum
PITC_050900
N
PCH_Pc21g11080
Penicillium rubens
PCH_Pc21g11080
N
SNOG_15212
Phaeosphaeria nodorum
SNOG_15212
N
PTT_06246
Pyrenophora teres
PTT_06246
N
SETTUDRAFT_106070
Setosphaeria turcica
SETTUDRAFT_106070
N
GSTUM_00003728001
Tuber melanosporum
GSTUM_00003728001
N
UREG_01500
Uncinocarpus reesii
UREG_01500
N
PV09_08801
Verruconis gallopava
PV09_08801
N