CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_90123
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_90123
T138759_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_90123
C2H2 ZF
70
91
LVCGTCRQLFTTVALMRKHKSG
estExt_fgenesh2_pg.C_90123
C2H2 ZF
125
147
LCRECWEEFDGPWHLMHHAGAVH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP18227
Atta cephalotes
ACEP18227
N
Cflo_05254--XP_001121063.1_APIME
Camponotus floridanus
Cflo_05254--XP_001121063.1_APIME
N
CpipJ_CPIJ011215
Culex pipiens
CpipJ_CPIJ011215
N
CPIJ011215
Culex quinquefasciatus
CPIJ011215
N
YQE_07460
Dendroctonus ponderosae
YQE_07460
N
Hsal_00150--XP_001121063.1_APIME
Harpegnathos saltator
Hsal_00150--XP_001121063.1_APIME
N
HMEL008788
Heliconius melpomene
HMEL008788
N
LDEC013195
Leptinotarsa decemlineata
LDEC013195
N
TC003626
Tribolium castaneum
TC003626
N