CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_Genewise1Plus.C_130057
(
Neurospora discreta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_Genewise1Plus.C_130057
T138865_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05024
M01882_2.00
Neurospora crassa
NNNGCCTCNN
NNGAGGCNNN
PBM
Weirauch et al.(2014)
pTH8933
0.822
0.911
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_130057
C2H2 ZF
189
210
YHCNDCGTSSTTKRDYERHLTT
estExt_Genewise1Plus.C_130057
C2H2 ZF
231
262
FHCLAQGCEYSHEGGKSFTREDNLWRHMKTVH
Links
Other
C2H2 ZF
family TFs
Other
Neurospora discreta
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCU05024
Neurospora crassa
NCU05024
D
0.822
NEUTE1DRAFT_141177
Neurospora tetrasperma
NEUTE1DRAFT_141177
I
0.792
SMAC_07701
Sordaria macrospora
SMAC_07701
I
0.800