estExt_Genewise1Plus.C_sca_1_chr1_3_00050 (Nectria haematococca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_Genewise1Plus.C_sca_1_chr1_3_00050 T138891_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU07952
M01890_2.00 		Neurospora crassa
YWNMGCCHY
RDGGCKNWR		 PBM
Weirauch et al.(2014)
pTH9003 		0.781 0.897
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_sca_1_chr1_3_00050 C2H2 ZF 493 515
estExt_Genewise1Plus.C_sca_1_chr1_3_00050 C2H2 ZF 521 543
estExt_Genewise1Plus.C_sca_1_chr1_3_00050 C2H2 ZF 549 579

Links

Other C2H2 ZF family TFs
Other Nectria haematococca TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008190 Aedes aegypti AAEL008190 N
AALB000200 Anopheles albimanus AALB000200 I
AARA003793 Anopheles arabiensis AARA003793 I
AATE012724 Anopheles atroparvus AATE012724 I
ACHR008323 Anopheles christyi ACHR008323 I
ACOM029390 Anopheles coluzzii ACOM029390 I
ACUA027275 Anopheles culicifacies ACUA027275 I
AEPI007123 Anopheles epiroticus AEPI007123 I
AFAF019729 Anopheles farauti AFAF019729 I
AFUN010726 Anopheles funestus AFUN010726 I
AGAP009983 Anopheles gambiae AGAP009983 I
AMAM007264 Anopheles maculatus AMAM007264 I
AMEC011376 Anopheles melas AMEC011376 I
AMEM008272 Anopheles merus AMEM008272 I
AMIN006744 Anopheles minimus AMIN006744 I
AQUA009094 Anopheles quadriannulatus AQUA009094 I
ASIS002214 Anopheles sinensis ASIS002214 I
ASTEI03995 Anopheles stephensi ASTEI03995 I
GB46156 Apis mellifera GB46156 N
ACEP23825 Atta cephalotes ACEP23825 I
BGIBMGA009116 Bombyx mori BGIBMGA009116 I
Cflo_08671--XP_001121050.1_APIME Camponotus floridanus Cflo_08671--XP_001121050.1_APIME I
CLEC001934 Cimex lectularius CLEC001934 I
CpipJ_CPIJ003113 Culex pipiens CpipJ_CPIJ003113 I
CPIJ003113 Culex quinquefasciatus CPIJ003113 I
KGM_16315 Danaus plexippus KGM_16315 N
YQE_06569 Dendroctonus ponderosae YQE_06569 N
GF14859 Drosophila ananassae FBgn0091886 I
GG24687 Drosophila erecta FBgn0116818 I
GH10058 Drosophila grimshawi FBgn0117539 I
net Drosophila melanogaster FBgn0002931 D
GI16429 Drosophila mojavensis FBgn0139177 I
GL13900 Drosophila persimilis FBgn0151505 I
GA11011 Drosophila pseudoobscura FBgn0071067 I
GM16704 Drosophila sechellia FBgn0171617 I
GD22993 Drosophila simulans FBgn0194385 I
GJ16214 Drosophila virilis FBgn0203399 I
GK21091 Drosophila willistoni FBgn0223083 I
GE16494 Drosophila yakuba FBgn0234011 I
HHAL005211-PA Halyomorpha halys HHAL005211-PA I
Hsal_05296--XP_001121050.1_APIME Harpegnathos saltator Hsal_05296--XP_001121050.1_APIME N
HMEL016722 Heliconius melpomene HMEL016722 N
LDEC018964 Leptinotarsa decemlineata LDEC018964 N
LCUP006840 Lucilia cuprina LCUP006840 I
MCINX005941 Melitaea cinxia MCINX005941 N
MDOA010091 Musca domestica MDOA010091 I
PHUM129210 Pediculus humanus PHUM129210 I
PPAI008042 Phlebotomus papatasi PPAI008042 N
SINV15468 Solenopsis invicta SINV15468 I
TC005579 Tribolium castaneum TC005579 N
L798_06974 Zootermopsis nevadensis L798_06974 I