CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22012051m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22012051m.g
T140831_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22012050m.p
C2H2 ZF
387
409
LICQTCGKIFRCRSSLSRHKWLH
Ocbimv22012050m.p
C2H2 ZF
414
436
HRCFVCKKAFHRKEHLYLHLKRH
Ocbimv22012050m.p
C2H2 ZF
442
465
ITCPICAMKGSNLHAIEEHIRQCH
Ocbimv22012053m.p
C2H2 ZF
387
409
LICQTCGKIFRCRSSLSRHKWLH
Ocbimv22012053m.p
C2H2 ZF
414
436
HRCFVCKKAFHRKEHLYLHLKRH
Ocbimv22012053m.p
C2H2 ZF
442
465
ITCPICAMKGSNLHAIEEHIRQCH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCU11295
Neurospora crassa
NCU11295
D
scaffold_3-snap.405.1
Neurospora discreta
scaffold_3-snap.405.1
I
NEUTE1DRAFT_128707
Neurospora tetrasperma
NEUTE1DRAFT_128707
I