Sakowv30035316m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30035316m.g T142437_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM12
M10213_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM12_01 		0.816 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23931296_peptide C2H2 ZF 226 248
23931296_peptide C2H2 ZF 254 276
23931296_peptide C2H2 ZF 282 306

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI007587 Acyrthosiphon pisum ACYPI007587 N
ACYPI072316 Acyrthosiphon pisum ACYPI072316 N
ACYPI081450 Acyrthosiphon pisum ACYPI081450 N