CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30040942m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30040942m.g
T142476_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23922560_peptide
C2H2 ZF
151
176
LECKWLKCNQKFSILEDLVNHVNDHH
23922560_peptide
C2H2 ZF
185
212
YCCRWNGCPRKGKGFNARYKMLIHVRTH
23922560_peptide
C2H2 ZF
218
240
HRCPQCDKCFSRLENLKIHNRSH
23922560_peptide
C2H2 ZF
246
270
YVCPVEGCNKRYSNSSDRFKHTRTH
23922560_peptide
C2H2 ZF
276
300
YYCKVVGCNKRYTDPSSLRKHIKTH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CERSUDRAFT_64184
Ceriporiopsis subvermispora
CERSUDRAFT_64184
N
DICSQDRAFT_172404
Dichomitus squalens
DICSQDRAFT_172404
N
GLOTRDRAFT_115511
Gloeophyllum trabeum
GLOTRDRAFT_115511
N
e_gw1.6.773.1
Heterobasidion annosum
e_gw1.6.773.1
N
HETIRDRAFT_435378
Heterobasidion irregulare
HETIRDRAFT_435378
N
PISMIDRAFT_101312
Pisolithus microcarpus
PISMIDRAFT_101312
N
SCLCIDRAFT_1220623
Scleroderma citrinum
SCLCIDRAFT_1220623
N
CY34DRAFT_812339
Suillus luteus
CY34DRAFT_812339
N
BN946_scf184815.g26
Trametes cinnabarina
BN946_scf184815.g26
N