Carubv10003820m.g (Capsella rubella)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Carubv10003820m.g T142700_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP5
M01851_2.00 		Arabidopsis thaliana
DSWTNNNN
NNNNAWSH		 PBM
Weirauch et al.(2014)
pTH7539 		0.764 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10003820m C2H2 ZF 57 79

Links

Other C2H2 ZF family TFs
Other Capsella rubella TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GF10774 Drosophila ananassae FBgn0087814 I
GG13417 Drosophila erecta FBgn0105689 I
GH14421 Drosophila grimshawi FBgn0121897 I
Max Drosophila melanogaster FBgn0017578 D
GI13548 Drosophila mojavensis FBgn0136303 I
GA21938 Drosophila pseudoobscura FBgn0081923 I
GM14884 Drosophila sechellia FBgn0169805 I
GD12293 Drosophila simulans FBgn0184028 I
GJ11907 Drosophila virilis FBgn0199160 I
GK19684 Drosophila willistoni FBgn0221682 I
GE22514 Drosophila yakuba FBgn0239734 I
GE22918 Drosophila yakuba FBgn0240119 I
LCUP011850 Lucilia cuprina LCUP011850 I
MDOA012035 Musca domestica MDOA012035 I
Ocbimv22020257m.g Octopus bimaculoides Ocbimv22020257m.g I
Sakowv30027986m.g Saccoglossus kowalevskii Sakowv30027986m.g I