Carubv10017428m.g (Capsella rubella)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Carubv10017428m.g T142728_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10017428m C2H2 ZF 300 321
Carubv10017428m C2H2 ZF 320 346

Links

Other C2H2 ZF family TFs
Other Capsella rubella TFs

259 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02328 Aegilops tauschii F775_02328 I 0.000
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I 0.000
Aquca_027_00052 Aquilegia coerulea Aquca_027_00052 I 0.000
LPERR01G00250 Leersia perrieri LPERR01G00250 I 0.000
mgf025001m Mimulus guttatus mgf025001m I 0.000
GSMUA_Achr1G08860_001 Musa acuminata GSMUA_Achr1G08860_001 I 0.000
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.000
GSMUA_Achr3G18990_001 Musa acuminata GSMUA_Achr3G18990_001 I 0.000
GSMUA_Achr4G02380_001 Musa acuminata GSMUA_Achr4G02380_001 I 0.000
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.000
GSMUA_Achr9G19520_001 Musa acuminata GSMUA_Achr9G19520_001 I 0.000
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I 0.000
OBART01G00330 Oryza barthii OBART01G00330 N 0.000
OBART03G15960 Oryza barthii OBART03G15960 I 0.000
OB07G32110 Oryza brachyantha OB07G32110 I 0.000
ORGLA03G0152700 Oryza glaberrima ORGLA03G0152700 I 0.000
OGLUM01G00330 Oryza glumaepatula OGLUM01G00330 N 0.000
OGLUM03G16100 Oryza glumaepatula OGLUM03G16100 I 0.000
BGIOSGA002595 Oryza indica BGIOSGA002595 N 0.000
BGIOSGA002593 Oryza indica BGIOSGA002593 N 0.000
OLONG_005610 Oryza longistaminata OLONG_005610 I 0.000
OMERI03G14270 Oryza meridionalis OMERI03G14270 I 0.000
ONIVA03G16920 Oryza nivara ONIVA03G16920 I 0.000
ONIVA01G00250 Oryza nivara ONIVA01G00250 N 0.000
OPUNC01G00300 Oryza punctata OPUNC01G00300 I 0.000
OPUNC07G25060 Oryza punctata OPUNC07G25060 I 0.000
ORUFI03G16510 Oryza rufipogon ORUFI03G16510 I 0.000
OS01G0104200 Oryza sativa OS01G0104200 N 0.000
OS03G0327800 Oryza sativa OS03G0327800 I 0.000
Pavir.Ea00837 Panicum virgatum Pavir.Ea00837 I 0.000
Pavir.J22666 Panicum virgatum Pavir.J22666 I 0.000
Pavir.J23256 Panicum virgatum Pavir.J23256 I 0.000
Sb01g036560 Sorghum bicolor Sb01g036560 I 0.000
Traes_2BS_924D34AA1 Triticum aestivum Traes_2BS_924D34AA1 I 0.000
Traes_2BS_C116E5668 Triticum aestivum Traes_2BS_C116E5668 I 0.000
TRAES3BF020100160CFD_g Triticum aestivum TRAES3BF020100160CFD_g N 0.000
GRMZM2G109627 Zea mays GRMZM2G109627 I 0.000