Carubv10017988m.g (Capsella rubella)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Carubv10017988m.g T142731_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G49930
M06814_2.00 		Arabidopsis thaliana
DGATTTC
GAAATCH		 Dap-seq
OMalley et al.(2016)
AT3G49930_col_a 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10017988m C2H2 ZF 89 111

Links

Other C2H2 ZF family TFs
Other Capsella rubella TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CADANGAG00001496 Aspergillus niger CADANGAG00001496 N
PEX1_052020 Penicillium expansum PEX1_052020 N
U727_0043132341 Penicillium solitum U727_0043132341 N