CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.contig_31438
(
Carica papaya
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
evm.TU.contig_31438
T142887_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.TU.contig_31438.1
C2H2 ZF
257
278
FTCRKCGKSFAVKGDWRTHEKN
evm.TU.contig_31438.1
C2H2 ZF
277
303
KNCGIIWYCICGSDFKHKRSLKDHIRA
Links
Other
C2H2 ZF
family TFs
Other
Carica papaya
TFs
271 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSBTAP00000000066-D1
Bos grunniens
ENSBTAP00000000066-D1
I
0.000
PRDM14
Bos taurus
ENSBTAG00000000060
I
0.000
PRDM14
Callithrix jacchus
ENSCJAG00000008052
I
0.000
PRDM14
Canis familiaris
ENSCAFG00000007696
I
0.000
PRDM14
Cavia porcellus
ENSCPOG00000027176
I
0.000
ENSCSAG00000013856
Chlorocebus sabaeus
ENSCSAG00000013856
I
0.000
ENSDNOG00000014500
Dasypus novemcinctus
ENSDNOG00000014500
I
0.000
Prdm14
Dipodomys ordii
ENSDORG00000010341
I
0.000
PRDM14
Equus caballus
ENSECAG00000014777
I
0.000
ENSFCAG00000001436
Felis catus
ENSFCAG00000001436
I
0.000
PRDM14
Gorilla gorilla
ENSGGOG00000011363
I
0.000
PRDM14
Homo sapiens
ENSG00000147596
D
0.000
ENSP00000276594
Macaca fascicularis
ENSP00000276594
I
0.000
ENSMMUG00000014191
Macaca mulatta
ENSMMUG00000014191
I
0.000
ENSMPUG00000010629
Mustela putorius furo
ENSMPUG00000010629
I
0.000
Prdm14
Mus musculus
ENSMUSG00000042414
D
0.000
PRDM14
Oryctolagus cuniculus
ENSOCUG00000027622
N
0.000
ENSOARG00000003528
Ovis aries
ENSOARG00000003528
I
0.000
PRDM14
Pan troglodytes
ENSPTRG00000020331
I
0.000
ENSPANG00000024378
Papio anubis
ENSPANG00000024378
I
0.000
ENSPPYG00000018658
Pongo abelii
ENSPPYG00000018658
I
0.000
Prdm14
Rattus norvegicus
ENSRNOG00000021792
I
0.000
ENSTSYG00000010610
Tarsius syrichta
ENSTSYG00000010610
I
0.000