CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_161.1
(
Carica papaya
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
evm.TU.supercontig_161.1
T142898_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_161.1
C2H2 ZF
77
101
FLCSYEGCGKTFIDAGALRKHSHIH
evm.model.supercontig_161.1
C2H2 ZF
106
130
YVCHYEGCGKKFLDSSKLKRHFLIH
evm.model.supercontig_161.1
C2H2 ZF
136
160
FVCPHEGCGKAFSLDFNLKSHMKTH
evm.model.supercontig_161.1
C2H2 ZF
166
191
HICPYADCGKRYAHEYKLKNHISSQH
evm.model.supercontig_161.1
C2H2 ZF
229
254
YACPYDGCEKAYIHEYKLKLHLRREH
Links
Other
C2H2 ZF
family TFs
Other
Carica papaya
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_05136
Capronia epimyces
A1O3_05136
N
PV07_04827
Cladophialophora immunda
PV07_04827
N
Z517_04920
Fonsecaea pedrosoi
Z517_04920
N
F503_05667
Ophiostoma piceae uamh
F503_05667
N
SPBR_02412
Sporothrix brasiliensis
SPBR_02412
N
HMPREF1624_02647
Sporothrix schenckii
HMPREF1624_02647
N