CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_51.84
(
Carica papaya
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
evm.TU.supercontig_51.84
T142921_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP5
M01851_2.00
Arabidopsis thaliana
DSWTNNNN
NNNNAWSH
PBM
Weirauch et al.(2014)
pTH7539
0.766
0.696
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_51.84
C2H2 ZF
59
81
YACKYCNKKFSTSQALGGHQNAH
Links
Other
C2H2 ZF
family TFs
Other
Carica papaya
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_074230
Aspergillus clavatus
CADACLAG00006381
N
AFUA_2G15260
Aspergillus fumigatus
CADAFUAG00004604
N
CADANGAG00007889
Aspergillus niger
CADANGAG00007889
N
EURHEDRAFT_417585
Aspergillus ruber
EURHEDRAFT_417585
N
M437DRAFT_60050
Aureobasidium melanogenum
M437DRAFT_60050
N
M438DRAFT_363806
Aureobasidium pullulans
M438DRAFT_363806
N
AUEXF2481DRAFT_234640
Aureobasidium subglaciale
AUEXF2481DRAFT_234640
N
A1O3_08818
Capronia epimyces
A1O3_08818
N
PV04_00541
Capronia semiimmersa
PV04_00541
N
Z519_02061
Cladophialophora bantiana
Z519_02061
N
G647_01486
Cladophialophora carrionii
G647_01486
N
PV07_06253
Cladophialophora immunda
PV07_06253
N
H072_136
Dactylellina haptotyla
H072_136
N
PV10_01954
Exophiala mesophila
PV10_01954
N
PV06_05578
Exophiala oligosperma
PV06_05578
N
PV06_00861
Exophiala oligosperma
PV06_00861
N
PV08_00876
Exophiala spinifera
PV08_00876
N
PV05_09876
Exophiala xenobiotica
PV05_09876
N
PV05_06583
Exophiala xenobiotica
PV05_06583
N
fgenesh1_pg.C_scaffold_6000355
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_6000355
N
PMAA_001790
Penicillium marneffei
PMAA_001790
N
JL09_g1719
Pichia kudriavzevii
JL09_g1719
N
MYCFIDRAFT_79333
Pseudocercospora fijiensis
MYCFIDRAFT_79333
N
Z518_04980
Rhinocladiella mackenziei
Z518_04980
N
PMAA_001790
Talaromyces marneffei
PMAA_001790
N
TSTA_099190
Talaromyces stipitatus
TSTA_099190
N