CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10033454.g
(
Linum usitatissimum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Lus10033454.g
T143145_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10033454
C2H2 ZF
221
242
FVCRKCGKPLAVKGDWRTHEKN
Lus10033454
C2H2 ZF
241
267
KNCGKRWLCVCGSDFKHKRSLKDHVKA
Links
Other
C2H2 ZF
family TFs
Other
Linum usitatissimum
TFs
143 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g161690
Brassica oleracea
Bo2g161690
I
0.000
Bo3g109270
Brassica oleracea
Bo3g109270
I
0.000
Bra029305
Brassica rapa
Bra029305
I
0.000
Cucsa.156880
Cucumis sativus
Cucsa.156880
I
0.000
Gorai.001G053900
Gossypium raimondii
Gorai.001G053900
I
0.000
Lus10016732.g
Linum usitatissimum
Lus10016732.g
I
0.000
Lus10022427.g
Linum usitatissimum
Lus10022427.g
I
0.000
cassava40548.m1
Manihot esculenta
cassava40548.m1
I
0.000
Pavir.Gb00795
Panicum virgatum
Pavir.Gb00795
I
0.000
FL
Populus trichocarpa
POPTR_0015s11820
I
0.000
PGSC0003DMG400014174
Solanum tuberosum
PGSC0003DMG400014174
I
0.000
LFY
Vitis vinifera
VIT_17s0000g00150
I
0.000