CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
orange1.1g037179m.g
(
Citrus sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
orange1.1g037179m.g
T143275_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g037179m
C2H2 ZF
193
214
FMCRKCGKFLAVKGDWRTHEKN
orange1.1g037179m
C2H2 ZF
213
239
KNCGKRWLCVCGSDFKHKRSLKDHIKA
Links
Other
C2H2 ZF
family TFs
Other
Citrus sinensis
TFs
217 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR04G13880
Leersia perrieri
LPERR04G13880
N
0.000
OBART04G17300
Oryza barthii
OBART04G17300
N
0.000
OB04G24520
Oryza brachyantha
OB04G24520
N
0.000
ORGLA04G0144200
Oryza glaberrima
ORGLA04G0144200
N
0.000
OLONG_009316
Oryza longistaminata
OLONG_009316
N
0.000
ONIVA04G15600
Oryza nivara
ONIVA04G15600
N
0.000