Pavir.Db00765 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Db00765 T143338_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Db00765.1.p C2H2 ZF 266 287
Pavir.Db00765.1.p C2H2 ZF 288 312

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04155 Aegilops tauschii F775_04155 N
BRADI1G03620 Brachypodium distachyon BRADI1G03620 N
MLOC_2933 Hordeum vulgare MLOC_2933 N
LPERR04G19190 Leersia perrieri LPERR04G19190 N
OBART04G23460 Oryza barthii OBART04G23460 N
OB04G30360 Oryza brachyantha OB04G30360 N
ORGLA04G0200000 Oryza glaberrima ORGLA04G0200000 N
OGLUM04G23390 Oryza glumaepatula OGLUM04G23390 N
BGIOSGA017023 Oryza indica BGIOSGA017023 N
ONIVA04G22790 Oryza nivara ONIVA04G22790 N
OPUNC04G20980 Oryza punctata OPUNC04G20980 N
ORUFI04G25140 Oryza rufipogon ORUFI04G25140 N
OS04G0590400 Oryza sativa OS04G0590400 N
Pavir.Ia00281 Panicum virgatum Pavir.Ia00281 N
Pavir.J16240 Panicum virgatum Pavir.J16240 N
Si034627m.g Setaria italica Si034627m.g N
Sb01g003110 Sorghum bicolor Sb01g003110 N
Traes_5BL_DF8EC4A24 Triticum aestivum Traes_5BL_DF8EC4A24 N
GRMZM2G368909 Zea mays GRMZM2G368909 N