Pavir.J33131 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.J33131 T143429_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J33131.1.p C2H2 ZF 155 178
Pavir.J33131.2.p C2H2 ZF 155 178

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I 0.000
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I 0.000
Aquca_024_00067 Aquilegia coerulea Aquca_024_00067 N 0.000
BRADI2G38380 Brachypodium distachyon BRADI2G38380 N 0.000
PK07533.1 Cannabis sativa PK07533.1 I 0.000
evm.TU.supercontig_18.43 Carica papaya evm.TU.supercontig_18.43 I 0.000
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I 0.000
Gorai.007G122800 Gossypium raimondii Gorai.007G122800 I 0.000
MLOC_52125 Hordeum vulgare MLOC_52125 N 0.000
Lus10040428.g Linum usitatissimum Lus10040428.g I 0.000
MDP0000205823 Malus domestica MDP0000205823 I 0.000
cassava36049.valid.m1 Manihot esculenta cassava36049.valid.m1 I 0.000
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.000
cassava23775.valid.m1 Manihot esculenta cassava23775.valid.m1 I 0.000
MTR_1g087040 Medicago truncatula MTR_1g087040 I 0.000
mgf018581m Mimulus guttatus mgf018581m I 0.000
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I 0.000
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I 0.000
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I 0.000
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I 0.000
OBART05G02070 Oryza barthii OBART05G02070 N 0.000
ORGLA05G0020300 Oryza glaberrima ORGLA05G0020300 N 0.000
OGLUM05G02130 Oryza glumaepatula OGLUM05G02130 N 0.000
BGIOSGA019118 Oryza indica BGIOSGA019118 I 0.000
BGIOSGA019116 Oryza indica BGIOSGA019116 N 0.000
OMERI05G02170 Oryza meridionalis OMERI05G02170 N 0.000
ONIVA05G02010 Oryza nivara ONIVA05G02010 I 0.000
OPUNC05G01750 Oryza punctata OPUNC05G01750 N 0.000
ORUFI05G02170 Oryza rufipogon ORUFI05G02170 N 0.000
OS05G0129300 Oryza sativa OS05G0129300 N 0.000
Pavir.J06041 Panicum virgatum Pavir.J06041 N 0.000
Pavir.Ca00746 Panicum virgatum Pavir.Ca00746 N 0.000
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.000
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I 0.000
30131.m007078 Ricinus communis 30131.m007078 I 0.000
SELMODRAFT_17884 Selaginella moellendorffii SELMODRAFT_17884 I 0.000
SELMODRAFT_17886 Selaginella moellendorffii SELMODRAFT_17886 I 0.000
Si023562m.g Setaria italica Si023562m.g N 0.000
Traes_1DS_62FDD3493 Triticum aestivum Traes_1DS_62FDD3493 N 0.000
Traes_1AS_94B6230FB1 Triticum aestivum Traes_1AS_94B6230FB1 N 0.000
Traes_1BS_A44C97E0F Triticum aestivum Traes_1BS_A44C97E0F N 0.000