SapurV1A.2546s0020 (Salix purpurea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SapurV1A.2546s0020 T143516_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IDD4
M06809_2.00
Arabidopsis thaliana
WWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWW
Dap-seq
OMalley et al.(2016)
IDD4_col_a
0.827 0.977
MGP
M06795_2.00
Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAWHDND
Dap-seq
OMalley et al.(2016)
MGP_col_a
0.827 0.977
MGP
M06796_2.00
Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHNN
Dap-seq
OMalley et al.(2016)
MGP_colamp_a
0.827 0.977
IDD7
M06803_2.00
Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHHN
Dap-seq
OMalley et al.(2016)
IDD7_col_a
0.827 0.930
AT1G14580
M06797_2.00
Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWWNNN
Dap-seq
OMalley et al.(2016)
At1g14580_col_a
0.822 0.953
AT1G14580
M06798_2.00
Arabidopsis thaliana
NNTTTTGTCKTTTWSYD

HRSWAAAMGACAAAANN
Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a
0.822 0.953
IDD5
M06807_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTTSYD

HRSAAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
IDD5_colamp_a
0.822 0.953
IDD5
M06808_2.00
Arabidopsis thaliana
WTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAW
Dap-seq
OMalley et al.(2016)
IDD5_col
0.822 0.953
NUC
M06822_2.00
Arabidopsis thaliana
NNNNNTTTTGTCKTYTWBYD

HRVWARAMGACAAAANNNNN
Dap-seq
OMalley et al.(2016)
NUC_col_a
0.803 0.953
NUC
M06823_2.00
Arabidopsis thaliana
NDTTTTGTCGTYTWNYD

HRNWARACGACAAAAHN
Dap-seq
OMalley et al.(2016)
NUC_colamp_a
0.803 0.953
JKD
M06818_2.00
Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAWWNDD
Dap-seq
OMalley et al.(2016)
JKD_col_a
0.797 0.907
IDD1
M06824_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTWBYD

HRVWAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a
0.794 0.907
IDD1
M06825_2.00
Arabidopsis thaliana
WDTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAHW
Dap-seq
OMalley et al.(2016)
At5g66730_col
0.794 0.907
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.2546s0020.1.p C2H2 ZF 134 155
SapurV1A.2546s0020.1.p C2H2 ZF 154 180

Links

Other C2H2 ZF family TFs
Other Salix purpurea TFs

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Score
Action
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AATE000662 Anopheles atroparvus AATE000662 I
ACHR001589 Anopheles christyi ACHR001589 I
ACOM036537 Anopheles coluzzii ACOM036537 I
ACUA021045 Anopheles culicifacies ACUA021045 I
ADAC007293 Anopheles darlingi ADAC007293 I
ADIR010174 Anopheles dirus ADIR010174 I
AEPI001605 Anopheles epiroticus AEPI001605 I
AFAF011922 Anopheles farauti AFAF011922 I
AFUN003926 Anopheles funestus AFUN003926 I
AGAP013200 Anopheles gambiae AGAP013200 I
AMEC010318 Anopheles melas AMEC010318 I
AMEM016267 Anopheles merus AMEM016267 I
AMIN003630 Anopheles minimus AMIN003630 I
AQUA006811 Anopheles quadriannulatus AQUA006811 I
ASIS002625 Anopheles sinensis ASIS002625 I
ASTEI04154 Anopheles stephensi ASTEI04154 I
BGIBMGA004818 Bombyx mori BGIBMGA004818 D
CpipJ_CPIJ014460 Culex pipiens CpipJ_CPIJ014460 I
CPIJ014460 Culex quinquefasciatus CPIJ014460 I
KGM_00077 Danaus plexippus KGM_00077 I
GF17893 Drosophila ananassae FBgn0094911 I
GF17896 Drosophila ananassae FBgn0094914 I
GG11370 Drosophila erecta FBgn0103670 I
GG11367 Drosophila erecta FBgn0103667 I
GH18050 Drosophila grimshawi FBgn0125518 I
GH18053 Drosophila grimshawi FBgn0125521 I
dan Drosophila melanogaster FBgn0039286 I
danr Drosophila melanogaster FBgn0039283 D
GI23731 Drosophila mojavensis FBgn0146456 I
GI23730 Drosophila mojavensis FBgn0146455 I
GL21909 Drosophila persimilis FBgn0159502 I
GL21906 Drosophila persimilis FBgn0159499 I
danr Drosophila pseudoobscura FBgn0072483 I
dan Drosophila pseudoobscura FBgn0071288 I
GM17814 Drosophila sechellia FBgn0172721 I
GD21183 Drosophila simulans FBgn0192634 I
GD21179 Drosophila simulans FBgn0192630 I
GJ23601 Drosophila virilis FBgn0210698 I
GJ23602 Drosophila virilis FBgn0210699 I
GK13890 Drosophila willistoni FBgn0215897 I
GK13892 Drosophila willistoni FBgn0215899 I
GE23564 Drosophila yakuba FBgn0240740 I
GE23568 Drosophila yakuba FBgn0240744 I
HMEL015598 Heliconius melpomene HMEL015598 I
LCUP015576 Lucilia cuprina LCUP015576 I
LCUP009760 Lucilia cuprina LCUP009760 I
LLOJ006231 Lutzomyia longipalpis LLOJ006231 I
MESCA003830 Megaselia scalaris MESCA003830 I
MCINX008551 Melitaea cinxia MCINX008551 I
MDOA003234 Musca domestica MDOA003234 I
PPAI009086 Phlebotomus papatasi PPAI009086 I