CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.2546s0020
(
Salix purpurea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SapurV1A.2546s0020
T143516_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IDD4
M06809_2.00
Arabidopsis thaliana
WWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWW
Dap-seq
OMalley et al.(2016)
IDD4_col_a
0.827
0.977
MGP
M06795_2.00
Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAWHDND
Dap-seq
OMalley et al.(2016)
MGP_col_a
0.827
0.977
MGP
M06796_2.00
Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHNN
Dap-seq
OMalley et al.(2016)
MGP_colamp_a
0.827
0.977
IDD7
M06803_2.00
Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHHN
Dap-seq
OMalley et al.(2016)
IDD7_col_a
0.827
0.930
AT1G14580
M06797_2.00
Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWWNNN
Dap-seq
OMalley et al.(2016)
At1g14580_col_a
0.822
0.953
AT1G14580
M06798_2.00
Arabidopsis thaliana
NNTTTTGTCKTTTWSYD
HRSWAAAMGACAAAANN
Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a
0.822
0.953
IDD5
M06807_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTTSYD
HRSAAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
IDD5_colamp_a
0.822
0.953
IDD5
M06808_2.00
Arabidopsis thaliana
WTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAW
Dap-seq
OMalley et al.(2016)
IDD5_col
0.822
0.953
NUC
M06822_2.00
Arabidopsis thaliana
NNNNNTTTTGTCKTYTWBYD
HRVWARAMGACAAAANNNNN
Dap-seq
OMalley et al.(2016)
NUC_col_a
0.803
0.953
NUC
M06823_2.00
Arabidopsis thaliana
NDTTTTGTCGTYTWNYD
HRNWARACGACAAAAHN
Dap-seq
OMalley et al.(2016)
NUC_colamp_a
0.803
0.953
JKD
M06818_2.00
Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAWWNDD
Dap-seq
OMalley et al.(2016)
JKD_col_a
0.797
0.907
IDD1
M06824_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTWBYD
HRVWAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a
0.794
0.907
IDD1
M06825_2.00
Arabidopsis thaliana
WDTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAHW
Dap-seq
OMalley et al.(2016)
At5g66730_col
0.794
0.907
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.2546s0020.1.p
C2H2 ZF
134
155
WKCEKCSKRYAVQSDWKAHSKT
SapurV1A.2546s0020.1.p
C2H2 ZF
154
180
KTCGTREYKCDCGTIFSRRDSFITHRA
Links
Other
C2H2 ZF
family TFs
Other
Salix purpurea
TFs
645 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL013733
Aedes aegypti
AAEL013733
I
AALB008673
Anopheles albimanus
AALB008673
I
AARA004167
Anopheles arabiensis
AARA004167
I
AATE000662
Anopheles atroparvus
AATE000662
I
ACHR001589
Anopheles christyi
ACHR001589
I
ACOM036537
Anopheles coluzzii
ACOM036537
I
ACUA021045
Anopheles culicifacies
ACUA021045
I
ADAC007293
Anopheles darlingi
ADAC007293
I
ADIR010174
Anopheles dirus
ADIR010174
I
AEPI001605
Anopheles epiroticus
AEPI001605
I
AFAF011922
Anopheles farauti
AFAF011922
I
AFUN003926
Anopheles funestus
AFUN003926
I
AGAP013200
Anopheles gambiae
AGAP013200
I
AMEC010318
Anopheles melas
AMEC010318
I
AMEM016267
Anopheles merus
AMEM016267
I
AMIN003630
Anopheles minimus
AMIN003630
I
AQUA006811
Anopheles quadriannulatus
AQUA006811
I
ASIS002625
Anopheles sinensis
ASIS002625
I
ASTEI04154
Anopheles stephensi
ASTEI04154
I
BGIBMGA004818
Bombyx mori
BGIBMGA004818
D
CpipJ_CPIJ014460
Culex pipiens
CpipJ_CPIJ014460
I
CPIJ014460
Culex quinquefasciatus
CPIJ014460
I
KGM_00077
Danaus plexippus
KGM_00077
I
GF17893
Drosophila ananassae
FBgn0094911
I
GF17896
Drosophila ananassae
FBgn0094914
I
GG11370
Drosophila erecta
FBgn0103670
I
GG11367
Drosophila erecta
FBgn0103667
I
GH18050
Drosophila grimshawi
FBgn0125518
I
GH18053
Drosophila grimshawi
FBgn0125521
I
dan
Drosophila melanogaster
FBgn0039286
I
danr
Drosophila melanogaster
FBgn0039283
D
GI23731
Drosophila mojavensis
FBgn0146456
I
GI23730
Drosophila mojavensis
FBgn0146455
I
GL21909
Drosophila persimilis
FBgn0159502
I
GL21906
Drosophila persimilis
FBgn0159499
I
danr
Drosophila pseudoobscura
FBgn0072483
I
dan
Drosophila pseudoobscura
FBgn0071288
I
GM17814
Drosophila sechellia
FBgn0172721
I
GD21183
Drosophila simulans
FBgn0192634
I
GD21179
Drosophila simulans
FBgn0192630
I
GJ23601
Drosophila virilis
FBgn0210698
I
GJ23602
Drosophila virilis
FBgn0210699
I
GK13890
Drosophila willistoni
FBgn0215897
I
GK13892
Drosophila willistoni
FBgn0215899
I
GE23564
Drosophila yakuba
FBgn0240740
I
GE23568
Drosophila yakuba
FBgn0240744
I
HMEL015598
Heliconius melpomene
HMEL015598
I
LCUP015576
Lucilia cuprina
LCUP015576
I
LCUP009760
Lucilia cuprina
LCUP009760
I
LLOJ006231
Lutzomyia longipalpis
LLOJ006231
I
MESCA003830
Megaselia scalaris
MESCA003830
I
MCINX008551
Melitaea cinxia
MCINX008551
I
MDOA003234
Musca domestica
MDOA003234
I
PPAI009086
Phlebotomus papatasi
PPAI009086
I