Thhalv10010909m.g (Eutrema salsugineum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Thhalv10010909m.g T143551_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.798 0.913
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.798 0.913
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.792 0.826
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.788 0.848
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.788 0.848
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.788 0.848
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.787 0.826
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.766 0.717
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.766 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10010909m C2H2 ZF 89 111
Thhalv10010909m C2H2 ZF 151 173

Links

Other C2H2 ZF family TFs
Other Eutrema salsugineum TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_04494 Arthroderma benhamiae ARB_04494 N
MCYG_05897 Arthroderma otae MCYG_05897 N
A1O3_04094 Capronia epimyces A1O3_04094 N
PV04_02683 Capronia semiimmersa PV04_02683 N
Z519_09269 Cladophialophora bantiana Z519_09269 N
G647_09037 Cladophialophora carrionii G647_09037 N
PV07_01628 Cladophialophora immunda PV07_01628 N
A1O5_12156 Cladophialophora psammophila A1O5_12156 N
A1O7_02526 Cladophialophora yegresii A1O7_02526 N
EPUS_02977 Endocarpon pusillum EPUS_02977 N
A1O9_06953 Exophiala aquamarina A1O9_06953 N
HMPREF1120_04939 Exophiala dermatitidis HMPREF1120_04939 N
PV10_03576 Exophiala mesophila PV10_03576 N
PV06_07847 Exophiala oligosperma PV06_07847 N
PV08_03361 Exophiala spinifera PV08_03361 N
PV05_07578 Exophiala xenobiotica PV05_07578 N
Z517_04420 Fonsecaea pedrosoi Z517_04420 N
MCYG_05897 Microsporum canis MCYG_05897 N
MGYG_06074 Microsporum gypseum MGYG_06074 N
Z518_02855 Rhinocladiella mackenziei Z518_02855 N
H101_06292 Trichophyton interdigitale H101_06292 N
TESG_07504 Trichophyton tonsurans TESG_07504 N
TRV_05783 Trichophyton verrucosum TRV_05783 N