Thhalv10021307m.g (Eutrema salsugineum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Thhalv10021307m.g T143575_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.822 0.957
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.803 0.891
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.799 0.761
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.799 0.739
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.796 0.826
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.796 0.826
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.796 0.826
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.787 0.804
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.787 0.804
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.776 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10021307m C2H2 ZF 109 131
Thhalv10021307m C2H2 ZF 169 191

Links

Other C2H2 ZF family TFs
Other Eutrema salsugineum TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000019741 Ailuropoda melanoleuca ENSAMEG00000019741 I 0.000
Alligator_sinensis_CCG016702.1 Alligator sinensis Alligator_sinensis_CCG016702.1 I 0.000
ZBTB22 Anolis carolinensis ENSACAG00000008573 I 0.000
ENSBTAP00000022387-D1 Bos grunniens ENSBTAP00000022387-D1 I 0.000
ZBTB22 Bos taurus ENSBTAG00000016829 I 0.000
ZBTB22 Callithrix jacchus ENSCJAG00000021676 I 0.000
ZBTB22 Canis familiaris ENSCAFG00000000977 I 0.000
ENSCPOG00000022843 Cavia porcellus ENSCPOG00000022843 I 0.000
Cmyd_10001850 Chelonia mydas Cmyd_10001850 I 0.000
ENSCSAG00000019307 Chlorocebus sabaeus ENSCSAG00000019307 I 0.000
Zbtb22 Dipodomys ordii ENSDORG00000013837 I 0.000
ZBTB22 Equus caballus ENSECAG00000019536 I 0.000
ZBTB22 Gorilla gorilla ENSGGOG00000006597 I 0.000
ZBTB22 Homo sapiens ENSG00000236104 D 0.000
ENSSTOG00000021763 Ictidomys tridecemlineatus ENSSTOG00000021763 I 0.000
ZBTB22 Loxodonta africana ENSLAFG00000018510 I 0.000
ENSP00000372683 Macaca fascicularis ENSP00000372683 I 0.000
ZBTB22 Macaca mulatta ENSMMUG00000003876 I 0.000
ENSMEUG00000002692 Macropus eugenii ENSMEUG00000002692 I 0.000
ENSMICG00000000931 Microcebus murinus ENSMICG00000000931 I 0.000
ENSMPUG00000018787 Mustela putorius furo ENSMPUG00000018787 I 0.000
Zbtb22 Mus musculus ENSMUSG00000051390 I 0.000
Myotis_brandtii_ZBTB22_10004256 Myotis brandtii Myotis_brandtii_ZBTB22_10004256 I 0.000
ZBTB22 Myotis lucifugus ENSMLUG00000017554 I 0.000
ZBTB22 Oryctolagus cuniculus ENSOCUG00000010568 I 0.000
zbtb22b Oryzias latipes ENSORLG00000006852 I 0.000
ZBTB22 Otolemur garnettii ENSOGAG00000033956 I 0.000
ENSOARG00000009465 Ovis aries ENSOARG00000009465 I 0.000
ZBTB22 Pan troglodytes ENSPTRG00000018044 I 0.000
ENSPANG00000007019 Papio anubis ENSPANG00000007019 I 0.000
ENSPSIG00000005781 Pelodiscus sinensis ENSPSIG00000005781 I 0.000
Pvit_19024 Pogona vitticeps Pvit_19024 I 0.000
ENSPPYG00000017249 Pongo abelii ENSPPYG00000017249 I 0.000
ZBTB22 Procavia capensis ENSPCAG00000006256 I 0.000
ZBTB22 Pteropus vampyrus ENSPVAG00000001913 I 0.000
Zbtb22 Rattus norvegicus ENSRNOG00000000476 I 0.000
ENSSHAG00000007426 Sarcophilus harrisii ENSSHAG00000007426 I 0.000
zbtb22b Takifugu rubripes ENSTRUG00000003954 I 0.000
zbtb22b Tetraodon nigroviridis ENSTNIG00000000019 I 0.000
zbtb22 Xenopus tropicalis XB-GENE-6458515 I 0.000