CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HHAL006659-PA
(
Halyomorpha halys
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HHAL006659-PA
T144075_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ab
M06173_2.00
Drosophila melanogaster
BBYHDVWNDRKWCCTGGYBDV
BHVRCCAGGWMYHNWBHDRVV
B1H
Zhu et al.(2011)
ab_SANGER_10_FBgn0259750
0.827
1.000
ab
M06174_2.00
Drosophila melanogaster
NVNNHVRCCAGGWMCYNHNNNNVNNN
NNNBNNNNDNRGKWCCTGGYBDNNBN
B1H
Zhu et al.(2011)
ab_SOLEXA_5_FBgn0259750
0.827
1.000
ab
M06175_2.00
Drosophila melanogaster
YACTTCCB
VGGAAGTR
B1H
Zhu et al.(2011)
CG32830_SANGER_10_FBgn0052830
0.827
1.000
ab
M06176_2.00
Drosophila melanogaster
NNNNVNNNNHSATTAAHNNVNNNN
NNNNBNNDTTAATSDNNNNBNNNN
B1H
Zhu et al.(2011)
CG32830_SOLEXA_5_FBgn0052830
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HHAL006659-PA
C2H2 ZF
11
33
PCPKCGKIYRSAHTLRTHLEDKH
HHAL006659-PA
C2H2 ZF
39
62
YRCVLCGTVAKSRNSLHSHMSRQH
Links
Other
C2H2 ZF
family TFs
Other
Halyomorpha halys
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FIBRA_08869
Fibroporia radiculosa
FIBRA_08869
N
M413DRAFT_442025
Hebeloma cylindrosporum
M413DRAFT_442025
N
gw1.17.230.1
Heterobasidion annosum
gw1.17.230.1
N
HETIRDRAFT_127414
Heterobasidion irregulare
HETIRDRAFT_127414
N
HYDPIDRAFT_47391
Hydnomerulius pinastri
HYDPIDRAFT_47391
N
SERLA73DRAFT_180967
Serpula lacrymans
SERLA73DRAFT_180967
N
BN946_scf184823.g4
Trametes cinnabarina
BN946_scf184823.g4
N