LCUP002077 (Lucilia cuprina)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 LCUP002077 T144157_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sob
M03674_2.00 		Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1 		0.823 0.983
sob
M03675_2.00 		Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2 		0.823 0.983
sob
M06088_2.00 		Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892 		0.823 0.983
sob
M06089_2.00 		Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892 		0.823 0.983
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.811 0.948
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.811 0.948
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.811 0.948
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.795 0.896
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.795 0.896
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.795 0.896
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.795 0.896
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP002077-PA C2H2 ZF 453 475
LCUP002077-PA C2H2 ZF 481 503
LCUP002077-PA C2H2 ZF 509 531
LCUP002077-PA C2H2 ZF 537 559
LCUP002077-PA C2H2 ZF 565 587

Links

Other C2H2 ZF family TFs
Other Lucilia cuprina TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV04_06756 Capronia semiimmersa PV04_06756 I
Z519_08172 Cladophialophora bantiana Z519_08172 I
G647_06179 Cladophialophora carrionii G647_06179 I
PV07_03186 Cladophialophora immunda PV07_03186 I
A1O5_05298 Cladophialophora psammophila A1O5_05298 I
HMPREF1541_10248 Cyphellophora europaea HMPREF1541_10248 I
A1O9_07504 Exophiala aquamarina A1O9_07504 I
HMPREF1120_04213 Exophiala dermatitidis HMPREF1120_04213 I
PV10_08405 Exophiala mesophila PV10_08405 I
PV06_10014 Exophiala oligosperma PV06_10014 I
PV11_06579 Exophiala sideris PV11_06579 I
PV08_08586 Exophiala spinifera PV08_08586 I
PV05_08058 Exophiala xenobiotica PV05_08058 I
Z517_05497 Fonsecaea pedrosoi Z517_05497 I
HCBG_03332 Histoplasma capsulatum HCBG_03332 D
MPH_11572 Macrophomina phaseolina MPH_11572 I
estExt_Genewise1Plus.C_11744 Mycosphaerella fijiensis estExt_Genewise1Plus.C_11744 I
UCRNP2_7184 Neofusicoccum parvum UCRNP2_7184 I
MYCFIDRAFT_55173 Pseudocercospora fijiensis MYCFIDRAFT_55173 I
Z518_05550 Rhinocladiella mackenziei Z518_05550 I