LCUP004097 (Lucilia cuprina)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 LCUP004097 T144199_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu
M03680_2.00 		Drosophila melanogaster
HCCRCCCACGCAH
DTGCGTGGGYGGD		 SELEX
Nitta et al.(2015)
klu_1 		0.822 0.967
klu
M03681_2.00 		Drosophila melanogaster
YMCGCCCMCGCAH
DTGCGKGGGCGKR		 SELEX
Nitta et al.(2015)
klu_2 		0.822 0.967
klu
M06114_2.00 		Drosophila melanogaster
MCACCCMCRCA
TGYGKGGGTGK		 B1H
Zhu et al.(2011)
klu_SANGER_10_FBgn0013469 		0.822 0.967
klu
M06115_2.00 		Drosophila melanogaster
NNNNMCACCCMCRCN
NGYGKGGGTGKNNNN		 B1H
Zhu et al.(2011)
klu_SOLEXA_5_FBgn0013469 		0.822 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP004097-PA C2H2 ZF 543 566
LCUP004097-PA C2H2 ZF 579 601
LCUP004097-PA C2H2 ZF 607 629
LCUP004097-PA C2H2 ZF 635 657

Links

Other C2H2 ZF family TFs
Other Lucilia cuprina TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK23633.1 Cannabis sativa PK23633.1 N
Ca_22262 Cicer arietinum Ca_22262 N
gene25213-v1.0-hybrid Fragaria vesca gene25213-v1.0-hybrid N
GLYMA02G31550 Glycine max GLYMA02G31550 N
GLYMA10G17510 Glycine max GLYMA10G17510 N
Gorai.006G137400 Gossypium raimondii Gorai.006G137400 N
MDP0000305771 Malus domestica MDP0000305771 N