CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU05061
(
Neurospora crassa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NCU05061
T144865_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05061
M01195_2.00
Neurospora crassa
NRGAGGCCYN
NRGGCCTCYN
PBM
Lambert et al.(2019)
pTH8822
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01195_2.00
C2H2 ZF
52
76
KCQAAEKCNYFAHSKELKKHYRTTH
M01195_2.00
C2H2 ZF
90
111
FECTKCKTSFVRKDFLARHQRV
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU05061
C2H2 ZF
300
324
KCQAAEKCNYFAHSKELKKHYRTTH
NCU05061
C2H2 ZF
338
359
FECTKCKTSFVRKDFLARHQRV
Links
Other
C2H2 ZF
family TFs
Other
Neurospora crassa
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000000238
Ailuropoda melanoleuca
ENSAMEG00000000238
N
ENSBTAP00000004954-D1
Bos grunniens
ENSBTAP00000004954-D1
N
MBD1
Bos taurus
ENSBTAG00000003801
N
MBD1
Callithrix jacchus
ENSCJAG00000004959
N
MBD1
Canis familiaris
ENSCAFG00000018928
N
MBD1
Cavia porcellus
ENSCPOG00000001671
N
ENSCSAG00000018070
Chlorocebus sabaeus
ENSCSAG00000018070
N
MBD1
Dasypus novemcinctus
ENSDNOG00000015998
N
Mbd1
Dipodomys ordii
ENSDORG00000013917
N
MBD1
Equus caballus
ENSECAG00000011497
N
MBD1
Felis catus
ENSFCAG00000015730
N
MBD1
Gorilla gorilla
ENSGGOG00000016966
N
MBD1
Homo sapiens
ENSG00000141644
N
ENSSTOG00000007780
Ictidomys tridecemlineatus
ENSSTOG00000007780
N
MBD1
Loxodonta africana
ENSLAFG00000031328
N
ENSMMUP00000011865
Macaca fascicularis
ENSMMUP00000011865
N
MBD1
Macaca mulatta
ENSMMUG00000009050
N
ENSMPUG00000008843
Mustela putorius furo
ENSMPUG00000008843
N
Myotis_brandtii_MBD1_10005913
Myotis brandtii
Myotis_brandtii_MBD1_10005913
N
MBD1
Myotis lucifugus
ENSMLUG00000008286
N
ENSNLEG00000011661
Nomascus leucogenys
ENSNLEG00000011661
N
MBD1
Ochotona princeps
ENSOPRG00000007647
N
MBD1
Ornithorhynchus anatinus
ENSOANG00000014593
N
MBD1
Oryctolagus cuniculus
ENSOCUG00000006554
N
MBD1
Otolemur garnettii
ENSOGAG00000003784
N
ENSOARG00000004218
Ovis aries
ENSOARG00000004218
N
MBD1
Pan troglodytes
ENSPTRG00000010021
N
ENSPPYG00000009158
Pongo abelii
ENSPPYG00000009158
N
MBD1
Procavia capensis
ENSPCAG00000001648
N
MBD1
Sus scrofa
ENSSSCG00000004516
N
ENSTSYG00000000509
Tarsius syrichta
ENSTSYG00000000509
N
MBD1
Tursiops truncatus
ENSTTRG00000015523
N