CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNAPOd2T00000666001
(
Oikopleura dioica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SNAPOd2T00000666001
T145218_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNAPOd2T00000666001
C2H2 ZF
211
233
YKCPICDAQFNRPANLKTHLRIH
SNAPOd2T00000666001
C2H2 ZF
239
261
YKCDTCSARFVQVAHLRAHMLIH
SNAPOd2T00000666001
C2H2 ZF
267
289
YPCQICGTRFRHLQTLKSHIRIH
SNAPOd2T00000666001
C2H2 ZF
295
318
FSCDECSLRFRHKSQLRLHLRTKH
Links
Other
C2H2 ZF
family TFs
Other
Oikopleura dioica
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000018736
Astyanax mexicanus
ENSAMXG00000018736
N
0.767
ENSAMXG00000012978
Astyanax mexicanus
ENSAMXG00000012978
N
0.782
BCL6
Callithrix jacchus
ENSCJAG00000014375
I
0.785
ENSCING00000007627
Ciona intestinalis
ENSCING00000007627
N
0.791
ENSCSAVG00000006275
Ciona savignyi
ENSCSAVG00000006275
N
0.796
bcl6ab
Danio rerio
ENSDARG00000069295
N
0.782
bcl6b
Danio rerio
ENSDARG00000069335
N
0.785
ENSGMOG00000013899
Gadus morhua
ENSGMOG00000013899
N
0.770
bcl6b
Gasterosteus aculeatus
ENSGACG00000019349
N
0.769
BCL6
Homo sapiens
ENSG00000113916
D
0.785
ENSLOCG00000013298
Lepisosteus oculatus
ENSLOCG00000013298
N
0.770
ENSONIG00000004819
Oreochromis niloticus
ENSONIG00000004819
N
0.782
bcl6b
Oryzias latipes
ENSORLG00000006659
N
0.782
ENSPANG00000017677
Papio anubis
ENSPANG00000017677
I
0.785
ENSPFOG00000009503
Poecilia formosa
ENSPFOG00000009503
N
0.782
bcl6b
Takifugu rubripes
ENSTRUG00000013220
N
0.770
bcl6b
Tetraodon nigroviridis
ENSTNIG00000002560
N
0.770