CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gtf3a.L
(
Xenopus laevis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-6252591
T145541_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAA49967
C2H2 ZF
13
37
YICSFADCGAAYNKNWKLQAHLCKH
AAA49967
C2H2 ZF
43
67
FPCKEEGCEKGFTSLHHLTRHSLTH
AAA49967
C2H2 ZF
73
98
FTCDSDGCDLRFTTKANMKKHFNRFH
AAA49967
C2H2 ZF
105
129
YVCHFENCGKAFKKHNQLKVHQFSH
AAA49967
C2H2 ZF
135
159
YECPHEGCDKRFSLPSRLKRHEKVH
AAA49967
C2H2 ZF
162
188
YPCKKDDSCSFVGKTWTLYLKHVAECH
AAA49967
C2H2 ZF
193
214
VCDVCNRKFRHKDYLRDHQKTH
AAA49967
C2H2 ZF
221
246
YLCPRDGCDRSYTTAFNLRSHIQSFH
AAA49967
C2H2 ZF
252
276
FVCEHAGCGKCFAMKKSLERHSVVH
AAI29562
C2H2 ZF
13
37
YICSFADCGAAYNKNWKLQAHLCKH
AAI29562
C2H2 ZF
43
67
FPCKEEGCEKGFTSLHHLTRHSLTH
AAI29562
C2H2 ZF
73
98
FTCDSDGCDLRFTTKANMKKHFNRFH
AAI29562
C2H2 ZF
105
129
YVCHFENCGKAFKKHNQLKVHQFSH
AAI29562
C2H2 ZF
135
159
YECPHEGCDKRFSLPSRLKRHEKVH
AAI29562
C2H2 ZF
162
188
YPCKKDDSCSFVGKTWTLYLKHVAECH
AAI29562
C2H2 ZF
193
214
VCDVCNRKFRHKDYLRDHQKTH
AAI29562
C2H2 ZF
221
246
YLCPRDGCDRSYTTAFNLRSHIQSFH
AAI29562
C2H2 ZF
252
276
FVCEHAGCGKCFAMKKSLERHSVVH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus laevis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PCH_Pc16g01070
Penicillium rubens
PCH_Pc16g01070
N