XP_002933331 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XP_002933331 T145750_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.827 1.000
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.827 1.000
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.827 1.000
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.827 0.986
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.827 0.986
Sp1
M03682_2.00 		Drosophila melanogaster
HNGCCACGCCCARK
MYTGGGCGTGGCND		 SELEX
Nitta et al.(2015)
Sp1_1 		0.814 0.986
Sp1
M06117_2.00 		Drosophila melanogaster
DHYMCGCCCMY
RKGGGCGKRDH		 B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378 		0.814 0.986
Sp1
M06118_2.00 		Drosophila melanogaster
NKHHMCGCCCMYNN
NNRKGGGCGKDDMN		 B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378 		0.814 0.986
Sp5
M09016_2.00 		Mus musculus
CYCCKCCYHYHBCYYHBYYYHYHB
VDRDRRRVDRRGVDRDRGGMGGRG		 Misc
Kulakovskiy et al.(2013)
SP5_MOUSE.H11MO.0.C 		0.794 0.928
SP5
M10319_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP5_Q2 		0.794 0.928
Sp1
M00765_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2013)
pTH0978 		0.774 0.884
Sp1
M08963_2.00 		Mus musculus
CCCBKCYCCKCCCCCNBCYCSBSC
GSVSGRGVNGGGGGMGGRGMVGGG		 Misc
Kulakovskiy et al.(2013)
SP1_MOUSE.H11MO.0.A 		0.774 0.884
Spps
M06159_2.00 		Drosophila melanogaster
KWDRCCMCGCCCMBH
DVKGGGCGKGGYHWM		 B1H
Zhu et al.(2011)
CG5669_SANGER_10_FBgn0039169 		0.771 0.855
Spps
M06160_2.00 		Drosophila melanogaster
BDDGCCMCGCCCMYN
NRKGGGCGKGGCHHV		 B1H
Zhu et al.(2011)
CG5669_SOLEXA_5_FBgn0039169 		0.771 0.855
SP1
M02921_2.00 		Homo sapiens
RCCMCDCCCMH
DKGGGHGKGGY		 SELEX
Jolma et al.(2013)
SP1_1 		0.771 0.870
SP1
M04605_2.00 		Homo sapiens
NWRRCCACGCCCMCH
DGKGGGCGTGGYYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_HT-SELEX 		0.771 0.870
SP1
M08096_2.00 		Homo sapiens
BYCCCKCCCCY
RGGGGMGGGRV		 ChIP-seq
Mathelier et al.(2014)
MA0079.3 		0.771 0.870
SP1
M08363_2.00 		Homo sapiens
CCCHNBCYCCDCCCY
RGGGHGGRGVNDGGG		 ChIP-seq
Schmitges et al.(2016)
P08047.MEME 		0.771 0.870
SP1
M08938_2.00 		Homo sapiens
BCSSSBCCHVGCCCCGCCCCYN
NRGGGGCGGGGCBDGGVSSSGV		 Misc
Kulakovskiy et al.(2013)
SP1_HUMAN.H11MO.0.A 		0.771 0.870
SP1
M10294_2.00 		Homo sapiens
DSCMHGCCYH
DRGGCDKGSH		 Transfac
Matys et al.(2006)
V$SP1_01 		0.771 0.870
SP1
M10295_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_02 		0.771 0.870
SP1
M10296_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_07 		0.771 0.870
SP1
M10297_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_08 		0.771 0.870
SP1
M10298_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q2_02 		0.771 0.870
SP1
M10299_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q3 		0.771 0.870
SP1
M10300_2.00 		Homo sapiens
VVCCCCGCCCMBN
NVKGGGCGGGGBB		 Transfac
Matys et al.(2006)
V$SP1_Q6 		0.771 0.870
SP1
M04606_2.00 		Homo sapiens
NWRGCCMCGCCCMYH
DRKGGGCGKGGCYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_Methyl-HT-SELEX 		0.771 0.870
Sp7
M09009_2.00 		Mus musculus
VHAVCCTRTAATTW
WAATTAYAGGBTDB		 Misc
Kulakovskiy et al.(2013)
SP7_MOUSE.H11MO.0.A 		0.764 0.855
SP7
M10258_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSX_Q3 		0.764 0.855
Sp4
M01862_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2014)
pTH4998 		0.762 0.899
Sp4
M00133_2.00 		Mus musculus
HMCGCCCMYN
NRKGGGCGKD		 PBM
Badis et al.(2009)
Sp4_1011 		0.762 0.899
SP4
M02879_2.00 		Homo sapiens
NWRGCCACGCCCMCHYN
NRDGKGGGCGTGGCYWN		 SELEX
Jolma et al.(2013)
SP4_1 		0.762 0.899
Sp4
M05859_2.00 		Mus musculus
DGNYMCGCCCHNN
NNDGGGCGKRNCH		 SMiLE-seq
Isakova et al.(2017)
SP4 		0.762 0.899
SP4
M08296_2.00 		Homo sapiens
NNVGCYCCKCCYMYH
DRKRGGMGGRGCBNN		 ChIP-seq
Schmitges et al.(2016)
Q02446.MEME 		0.762 0.899
SP4
M08873_2.00 		Homo sapiens
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV		 Misc
Kulakovskiy et al.(2013)
SP4_HUMAN.H11MO.0.A 		0.762 0.899
Sp4
M08975_2.00 		Mus musculus
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV		 Misc
Kulakovskiy et al.(2013)
SP4_MOUSE.H11MO.0.B 		0.762 0.899
SP4
M10165_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP4_Q3 		0.762 0.899
SP4
M10166_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP4_Q5 		0.762 0.899
SP3
M02910_2.00 		Homo sapiens
VCCMCRCCCMY
RKGGGYGKGGB		 SELEX
Jolma et al.(2013)
SP3_1 		0.761 0.870
SP3
M04558_2.00 		Homo sapiens
NRCCACGCCCMYH
DRKGGGCGTGGYN		 SELEX
Yin et al.(2017)
SP3_eDBD_HT-SELEX 		0.761 0.870
SP3
M08920_2.00 		Homo sapiens
NBBNVSCCCCKCCCMBBBNN
NNVVVKGGGMGGGGSBNVVN		 Misc
Kulakovskiy et al.(2013)
SP3_HUMAN.H11MO.0.B 		0.761 0.870
SP3
M10263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP3_Q3_01 		0.761 0.870
SP3
M10264_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP3_Q3 		0.761 0.870
SP3
M04559_2.00 		Homo sapiens
NRCCMCGCCCMCH
DGKGGGCGKGGYN		 SELEX
Yin et al.(2017)
SP3_eDBD_Methyl-HT-SELEX 		0.761 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002933331 C2H2 ZF 387 411
XP_002933331 C2H2 ZF 417 441
XP_002933331 C2H2 ZF 447 469

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

587 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI006497 Acyrthosiphon pisum ACYPI006497 N
AALB003225 Anopheles albimanus AALB003225 N
AARA006109 Anopheles arabiensis AARA006109 N
AATE009040 Anopheles atroparvus AATE009040 N
ACHR007377 Anopheles christyi ACHR007377 N
ACOM038290 Anopheles coluzzii ACOM038290 N
ACUA025224 Anopheles culicifacies ACUA025224 N
ADAC004659 Anopheles darlingi ADAC004659 N
ADIR009258 Anopheles dirus ADIR009258 N
AEPI000432 Anopheles epiroticus AEPI000432 N
AFAF009884 Anopheles farauti AFAF009884 N
AFUN008496 Anopheles funestus AFUN008496 N
AGAP004854 Anopheles gambiae AGAP004854 N
AMAM014474 Anopheles maculatus AMAM014474 N
AMEC004492 Anopheles melas AMEC004492 N
AMEM014063 Anopheles merus AMEM014063 N
AMIN011637 Anopheles minimus AMIN011637 N
AQUA000338 Anopheles quadriannulatus AQUA000338 N
ASTEI05939 Anopheles stephensi ASTEI05939 N
ENSAMXG00000018241 Astyanax mexicanus ENSAMXG00000018241 N
ENSAMXG00000013606 Astyanax mexicanus ENSAMXG00000013606 N
BGLB000541 Biomphalaria glabrata BGLB000541 I
BGIBMGA004558 Bombyx mori BGIBMGA004558 N
CaO19.10013 Candida albicans CaO19.10013 I
CaO19.2476 Candida albicans CaO19.2476 I
CD36_05420 Candida dubliniensis CD36_05420 I
G210_1683 Candida maltosa G210_1683 I
CORT_0B08690 Candida orthopsilosis CORT_0B08690 I
CPAG_04992 Candida parapsilosis CPAG_04992 I
CTRG_04819 Candida tropicalis CTRG_04819 I
ENSCHOG00000011802 Choloepus hoffmanni ENSCHOG00000011802 N
CLEC002198 Cimex lectularius CLEC002198 N
CLEC007074 Cimex lectularius CLEC007074 N
CLEC012210 Cimex lectularius CLEC012210 N
CGI_10006980 Crassostrea gigas CGI_10006980 I
KGM_16549 Danaus plexippus KGM_16549 N
KGM_20601 Danaus plexippus KGM_20601 N
arid1ab Danio rerio ENSDARG00000101891 N
DAPPUDRAFT_327651 Daphnia pulex DAPPUDRAFT_327651 N
DEHA2D02310g Debaryomyces hansenii DEHA2D02310g I
YQE_09239 Dendroctonus ponderosae YQE_09239 N
ENSGMOG00000001024 Gadus morhua ENSGMOG00000001024 N
ENSGMOG00000012045 Gadus morhua ENSGMOG00000012045 N
ENSGACG00000006735 Gasterosteus aculeatus ENSGACG00000006735 N
arid1ab Gasterosteus aculeatus ENSGACG00000007627 N
Gfo_R011571 Geospiza fortis Gfo_R011571 N
HHAL005964-PA Halyomorpha halys HHAL005964-PA N
HMEL015554 Heliconius melpomene HMEL015554 N
ENSLOCG00000003798 Lepisosteus oculatus ENSLOCG00000003798 N
LDEC011073 Leptinotarsa decemlineata LDEC011073 I
LotgiG131492 Lottia gigantea LotgiG131492 I
MCINX004970 Melitaea cinxia MCINX004970 N
MCINX012993 Melitaea cinxia MCINX012993 N
GNLVRS01_PISO0I02516g Millerozyma farinosa GNLVRS01_PISO0I02516g I
GNLVRS01_PISO0J04299g Millerozyma farinosa GNLVRS01_PISO0J04299g I
ML16136a Mnemiopsis leidyi ML16136a N
Ocbimv22032810m.g Octopus bimaculoides Ocbimv22032810m.g I
ENSONIG00000008068 Oreochromis niloticus ENSONIG00000008068 N
ENSONIG00000007618 Oreochromis niloticus ENSONIG00000007618 N
ENSOANG00000030531 Ornithorhynchus anatinus ENSOANG00000030531 N
PHUM080380 Pediculus humanus PHUM080380 N
estExt_gwp_genewisePlus_human.C_chr_1.10215 Pichia stipitis estExt_gwp_genewisePlus_human.C_chr_1.10215 I
ENSPFOG00000002208 Poecilia formosa ENSPFOG00000002208 N
ENSPFOG00000015517 Poecilia formosa ENSPFOG00000015517 N
ENSPFOG00000007276 Poecilia formosa ENSPFOG00000007276 N
ENSPVAG00000010595 Pteropus vampyrus ENSPVAG00000010595 N
RPRC005301 Rhodnius prolixus RPRC005301 N
ENSSHAG00000000588 Sarcophilus harrisii ENSSHAG00000000588 N
PICST_85882 Scheffersomyces stipitis PICST_85882 I
SPAPADRAFT_131982 Spathaspora passalidarum SPAPADRAFT_131982 I
SPPG_05401 Spizellomyces punctatus SPPG_05401 N
L892_g25633 Steinernema scapterisci L892_g25633 N
ENSSSCG00000028486 Sus scrofa ENSSSCG00000028486 N
arid1ab Takifugu rubripes ENSTRUG00000012325 N
ENSTSYG00000011521 Tarsius syrichta ENSTSYG00000011521 N
ENSTNIG00000017481 Tetraodon nigroviridis ENSTNIG00000017481 N
arid1aa Tetraodon nigroviridis ENSTNIG00000009659 N
TC013586 Tribolium castaneum TC013586 N
XP_002934686 Xenopus tropicalis XP_002934686 N
ENSXMAG00000010716 Xiphophorus maculatus ENSXMAG00000010716 N
ENSXMAG00000009940 Xiphophorus maculatus ENSXMAG00000009940 N