11988_Multiple (Saccharomyces mikatae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 11988_Multiple T145914_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAP1
M08416_2.00 		Saccharomyces cerevisiae
ACCYTMARGGTBRTG
CAYVACCYTKARGGT		 ChIP-chip
Mathelier et al.(2014)
MA0440.1 		0.768 0.898
ZAP1
M08531_2.00 		Saccharomyces cerevisiae
ACCCTMAAGGT
ACCTTKAGGGT		 Misc
DeBoer et al.(2011)
YJL056C_469 		0.768 0.898
ZAP1
M10396_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ZAP1_01 		0.768 0.898
ZAP1
M10397_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ZAP1_Q6_01 		0.768 0.898
ZAP1
M10398_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ZAP1_Q6 		0.768 0.898
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
11988_Multiple C2H2 ZF 392 417
11988_Multiple C2H2 ZF 425 449
11988_Multiple C2H2 ZF 455 477
11988_Multiple C2H2 ZF 483 505
11988_Multiple C2H2 ZF 511 533
11988_Multiple C2H2 ZF 537 558

Links

Other C2H2 ZF family TFs
Other Saccharomyces mikatae TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SU7_1785 Saccharomyces arboricola SU7_1785 I 0.810
ZAP1 Saccharomyces cerevisiae YJL056C D 0.768
11483_YJL056C Saccharomyces paradoxus 11483_YJL056C I 0.816