BGLB012676 (Biomphalaria glabrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 BGLB012676 T150834_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.769 0.867
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.769 0.867
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.769 0.867
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.761 0.850
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.761 0.850
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB012676-PA C2H2 ZF 191 212
BGLB012676-PA C2H2 ZF 218 240
BGLB012676-PA C2H2 ZF 567 589
BGLB012676-PA C2H2 ZF 595 617
BGLB012676-PA C2H2 ZF 625 646

Links

Other C2H2 ZF family TFs
Other Biomphalaria glabrata TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M378DRAFT_401669 Amanita muscaria M378DRAFT_401669 N 0.000
BOTBODRAFT_25595 Botryobasidium botryosum BOTBODRAFT_25595 N 0.000
GALMADRAFT_248753 Galerina marginata GALMADRAFT_248753 N 0.000
GLOTRDRAFT_127510 Gloeophyllum trabeum GLOTRDRAFT_127510 N 0.000
M413DRAFT_172756 Hebeloma cylindrosporum M413DRAFT_172756 N 0.000
HYDPIDRAFT_42253 Hydnomerulius pinastri HYDPIDRAFT_42253 N 0.000
JAAARDRAFT_37116 Jaapia argillacea JAAARDRAFT_37116 N 0.000
K443DRAFT_107454 Laccaria amethystina K443DRAFT_107454 N 0.000
K443DRAFT_676663 Laccaria amethystina K443DRAFT_676663 N 0.000
K443DRAFT_92166 Laccaria amethystina K443DRAFT_92166 N 0.000
LACBIDRAFT_303095 Laccaria bicolor LACBIDRAFT_303095 N 0.000
LACBIDRAFT_313619 Laccaria bicolor LACBIDRAFT_313619 N 0.000
LACBIDRAFT_303218 Laccaria bicolor LACBIDRAFT_303218 N 0.000
LACBIDRAFT_303137 Laccaria bicolor LACBIDRAFT_303137 N 0.000
LACBIDRAFT_299937 Laccaria bicolor LACBIDRAFT_299937 N 0.000
PAXRUDRAFT_567209 Paxillus rubicundulus PAXRUDRAFT_567209 N 0.000
PAXRUDRAFT_825895 Paxillus rubicundulus PAXRUDRAFT_825895 N 0.000
PILCRDRAFT_823959 Piloderma croceum PILCRDRAFT_823959 N 0.000
PISMIDRAFT_16314 Pisolithus microcarpus PISMIDRAFT_16314 N 0.000
PISMIDRAFT_679110 Pisolithus microcarpus PISMIDRAFT_679110 N 0.000
M404DRAFT_997965 Pisolithus tinctorius M404DRAFT_997965 N 0.000
PLEOSDRAFT_1095820 Pleurotus ostreatus PLEOSDRAFT_1095820 N 0.000
V565_052720 Rhizoctonia solani V565_052720 N 0.000
SCHCODRAFT_257926 Schizophyllum commune SCHCODRAFT_257926 N 0.000
SCLCIDRAFT_106570 Scleroderma citrinum SCLCIDRAFT_106570 N 0.000
SCLCIDRAFT_1208064 Scleroderma citrinum SCLCIDRAFT_1208064 N 0.000
SERLA73DRAFT_168168 Serpula lacrymans SERLA73DRAFT_168168 N 0.000
CY34DRAFT_729847 Suillus luteus CY34DRAFT_729847 N 0.000
CY34DRAFT_26021 Suillus luteus CY34DRAFT_26021 N 0.000