CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDOA001493
(
Musca domestica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
MDOA001493
T151198_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
jim
M06123_2.00
Drosophila melanogaster
BKKNNKTTTTKTTKB
VMAAMAAAAMNNMMV
B1H
Zhu et al.(2011)
jim_F1-9_SOLEXA_2.5_FBgn0027339
0.825
0.966
jim
M06124_2.00
Drosophila melanogaster
TSKTTTTTTTT
AAAAAAAAMSA
B1H
Zhu et al.(2011)
jim_SANGER_2.5_FBgn0027339
0.825
0.966
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDOA001493-PA
C2H2 ZF
342
364
FKCLTCGKDFKQKSTLLQHDRIH
MDOA001493-PA
C2H2 ZF
370
392
YPCSECGKRFRQQSHLTQHLRIH
MDOA001493-PA
C2H2 ZF
398
420
FTCGYCNRGFRQRAILNQHVRIH
MDOA001493-PA
C2H2 ZF
426
448
FACPECGKHFRQKAILNQHVRTH
MDOA001493-PA
C2H2 ZF
534
556
VRCPICDKEFKQKTTLLQHGCIH
MDOA001493-PA
C2H2 ZF
562
584
YPCPECGKRFRQQSHLTQHLRIH
MDOA001493-PA
C2H2 ZF
590
612
FGCLYCPRFFRQRTILNQHVRIH
MDOA001493-PA
C2H2 ZF
618
640
YKCGQCGKDFRQKAILDQHTRTH
MDOA001493-PA
C2H2 ZF
646
670
FCCPMPNCRRRFATENEVTKHIDNH
Links
Other
C2H2 ZF
family TFs
Other
Musca domestica
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy