CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ASU_05270
(
Ascaris suum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ASU_05270
T152303_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mnm-2
M00616_2.00
Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY
PBM
Narasimhan et al.(2015)
pTH9080
0.790
0.884
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ASU_05270
C2H2 ZF
180
202
YRCDICEKTFSRSNTLITHKRIH
ASU_05270
C2H2 ZF
208
230
FQCDHCGRAFRQPGNLTRHRFTH
ASU_05270
C2H2 ZF
236
258
YVCSYCEKAFNRASNLHTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Ascaris suum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy